Job Description P37051 Confidence 25.72% Date Thu Jan 5 11:54:42 GMT 2012 Rank 273 Aligned Residues 87 % Identity 11% Template c3dm5A_ PDB info PDB header:rna binding protein, transport protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: structures of srp54 and srp19, the two proteins assembling2 the ribonucleic core of the signal recognition particle3 from the archaeon pyrococcus furiosus. Resolution 2.51 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure															.	.	.	.																																				.	.	.	.
Query SS confidence															.	.	.	.																																				.	.	.	.
Query Sequence		L	N	P	A	G	R	R	R	I	V	I	L	V	.	.	.	.	T	K	E	A	H	C	L	G	D	L	L	M	K	A	N	Y	G	G	L	D	V	E	I	A	A	V	I	G	N	H	D	T	L	R	S	.	.	.	.	L	V	E	R	F	D	I	P	F	E	L	V	S	H	E	G	L	T	R	N	E	H	D	Q
Query Conservation															.	.	.	.																																				.	.	.	.
Alig confidence															.	.	.	.																																				.	.	.	.									.
Template Conservation																																																																		.
Template Sequence		I	E	I	K	E	K	P	T	I	L	L	M	V	G	I	Q	G	S	G	K	T	T	T	V	A	K	L	A	R	Y	F	Q	K	R	G	Y	K	V	G	V	V	C	S	D	T	W	R	P	G	A	Y	H	Q	L	R	Q	L	L	D	R	Y	H	I	E	.	V	F	G	N	P	Q	E	K	D	A	I	K	L	A	K
Template Known Secondary structure						S	S	S									T	T	S	S														T	T	T											S	S	T											G	G	G	T			.					T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	A	D	A	I	D	A	Y	Q	P	D	Y	V	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	G	V	D	Y	F	K	S	K	G	V	D	I	I	I	V
Template Known Secondary structure										T	T		S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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