 |
Job Description | P37051 | Confidence | 31.82% | Date | Thu Jan 5 11:54:42 GMT 2012 |
Rank | 233 | Aligned Residues | 68 |
% Identity | 18% | Template | c2yyaB_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:phosphoribosylamine--glycine ligase; |
PDBTitle: crystal structure of gar synthetase from aquifex aeolicus
|
Resolution | 2.40 Å |
|
 |
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | V | T | K | E | A | H | C | L | G | D | L | L | M | K | A | N | Y | G | G | L | D | V | E | I | A | A | V | I | G | N | H | D | T | L | R | S | L | V | E | R | F | D | I | P | F | E | L | V | S | H | E | G | L | T | R | N | E | H | D | Q | K | M | A | D | A | I | D | A | Y | Q | P | D | Y | V | V | L | A | K |
Query Conservation |   |
|
|
|
|
|   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
Template Sequence |   |
V | L | V | V | G | N | G | G | R | E | H | A | I | A | W | K | V | A | Q | S | P | L | V | K | E | L | Y | V | A | . |
K | G | N | A | G | I | W | E | I | A | K | R | V | D | I | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | T | D | V | E | K | L | A | E | F | A | K | N | E | G | V | D | F | T | I | V | G | P |
Template Known Secondary structure |   |
 |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T |
| S |  |  |  |  |  | . | S |
|
| T | T | G | G | G | T | S |  |  |  |
| S |
| . | . | . | . | . | . | . | . | . | . | . | T | T |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|