 |
Job Description | P37051 | Confidence | 45.49% | Date | Thu Jan 5 11:54:42 GMT 2012 |
Rank | 166 | Aligned Residues | 76 |
% Identity | 11% | Template | c2vpqA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:acetyl-coa carboxylase; |
PDBTitle: crystal structure of biotin carboxylase from s. aureus2 complexed with amppnp
|
Resolution | 2.1 Å |
|
 |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | |
150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | R | I | V | I | L | V | T | K | E | A | H | C | L | G | D | L | L | M | K | A | N | Y | G | G | L | D | V | E | I | A | A | V | I | G | N | H | D | T | L | R | S | L | V | E | R | F | D | I | P | F | E | L | V | S | H | E | G | L | T | R | N | E | H | D | . |
Q | K | M | A | D | A | I | D | A | Y | Q | P | D | Y |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
| . |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |   |
|   |   | . |
|   |   |
|
|
|
|
|   |   |   |
|   | . | . | . | . |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |
|   |
Template Sequence |   |
K | K | V | L | I | A | N | R | G | E | I | . |
A | V | R | I | I | R | A | C | R | D | L | G | I | . |
. |
. |
. |
Q | T | V | A | I | Y | S | E | G | D | K | D | A | L | H | T | Q | I | A | D | E | A | Y | C | V | G | P | T | L | S | K | D | S | Y | L | N | I | P | N | I | L | S | I | A | T | S | T | G | C | D | G |
Template Known Secondary structure |   |
|  |  |  |  |
|
|
|  |  |  | . |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . |  |  |  |  |  |  |  | G | G | G | T | T |
|  |  |  |  |  | S | S |  |  |  |  |  |  |
| S | S | G | G | G | T | T | T |
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | |
. | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
  |
  |   |
164 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
V | V |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
|   |
Template Sequence |   |
V | H |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
 |  |
Template SS confidence |   |
|
|
  |   |
77 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|