Job Description P37051 Confidence 53.82% Date Thu Jan 5 11:54:42 GMT 2012 Rank 139 Aligned Residues 135 % Identity 12% Template c2ph5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:homospermidine synthase; PDBTitle: crystal structure of the homospermidine synthase hss from legionella2 pneumophila in complex with nad, northeast structural genomics target3 lgr54 Resolution 2.50 Å

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		R	R	R	I	V	I	L	V	T	K	E	A	H	C	L	G	D	L	L	M	K	A	N	Y	.	G	G	L	D	V	E	I	A	A	V	I	G	N	H	D	T	L	R	S	L	V	E	R	F	D	I	P	F	E	L	V	S	H	E	G	L	T	R	N	E	H	D	Q	K	M	A	D	A	I	D	A	Y	Q	P	D
Query Conservation																										.
Alig confidence									.	.																.																																									.	.	.	.								.
Template Conservation									.	.																																																									.	.	.	.								.
Template Sequence		K	N	R	F	V	I	L	.	.	G	F	G	C	V	G	Q	A	L	X	P	L	I	F	E	K	F	D	I	K	P	S	Q	V	T	I	I	A	A	E	G	T	K	V	D	V	A	Q	Q	Y	G	V	S	F	K	L	Q	Q	I	T	P	Q	N	Y	L	E	.	.	.	.	V	I	G	S	T	L	E	.	E	N	D
Template Known Secondary structure			S						.	.			S														B				G	G	G						S	S			S								T										T	T	T				.	.	.	.		T	G	G	G			.	T	T
Template Predicted Secondary structure									.	.																																																									.	.	.	.								.
Template SS confidence
		13	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.		.	.	.
		163	.	.	.	.			.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																																																		.
Query SS confidence							.	.																																																		.
Query Sequence		Y	V	V	L	A	.	.	K	Y	M	R	V	L	T	P	E	F	V	A	R	F	P	N	K	I	I	N	I	H	H	S	F	L	P	A	F	I	G	A	R	P	Y	H	Q	A	Y	E	R	G	V	K	I	I	G	A	T	.	A	H	Y	V	N	D	N	L	D	E	G
Query Conservation							.	.																																																		.
Alig confidence							.	.																																																		.			.	.
Template Conservation																																																													.	.
Template Sequence		F	L	I	D	V	S	I	G	I	S	S	L	A	L	I	I	L	C	N	Q	K	G	A	L	Y	I	N	A	A	T	E	P	W	K	E	R	R	T	N	Y	S	L	R	E	E	V	L	R	L	K	D	K	T	Q	K	T	A	L	I	.	.	T	H	G	A	N	P	G
Template Known Secondary structure								S	S	S													T						S	S																			T	T	T	T	T			S					.	.	S		B	T	T	T	B
Template Predicted Secondary structure																																																													.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions