 |
Job Description | P0ABS5 | Confidence | 33.78% | Date | Thu Jan 5 11:16:14 GMT 2012 |
Rank | 93 | Aligned Residues | 66 |
% Identity | 12% | Template | d1xmxa_ |
SCOP info | Restriction endonuclease-like
| Restriction endonuclease-like
| Hypothetical protein VC1899
|
Resolution | 2.10 |
|
 |
  |   |
282 | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | |
|
. | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  | . | . |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | S | L | G | T | S | T | T | A | D | H | I | Q | L | L | . |
. |
F | R | A | T | N | N | V | I | C | C | Y | D | G | D | R | A | G | R | D | A | A | W | R | A | L | E | T | A | L | P | Y | M | T | D | G | R | Q | L | R | F | M | F | L | P | D | G | E | D | P | D | T | L | V | R | K |
Query Conservation |   |
|
|   |   |
|
|
|   |
|   |   |   |   |   |   |
| . | . |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |
|   |
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |
|
|   |
|
|   |
|
|   |
|   |   |   |   |   |
|   |   |
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   | . | . | . | . | . |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
V | G | I | I | D | Q | D | P | V | R | L | V | T | P | L | L | D | H | R | T | V | S | R | H | I | I | F | I | G | D | H | T | Q | T | V | I | Y | Q | R | L | S | D | V | . |
. |
. |
. |
. |
L | N | K | R | N | I | S | T | D | F | F | E | I | P | A | G | S | N | T | S | A | I | K | S | A |
Template Known Secondary structure |   |
 |  |  |
|
| S | S |
|  |  |  |  |  |  |  |  | S | T | T |
|
|
|
|  |  |  |  |  |  |
| G | G | G |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  | T | T |
|  |  |  |  |  |  |
|
| S | S | S |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|