Job Description P0ABS5 Confidence 31.21% Date Thu Jan 5 11:16:14 GMT 2012 Rank 101 Aligned Residues 57 % Identity 16% Template c3gn5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); PDBTitle: structure of the e. coli protein mqsa (ygit/b3021) Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.														.	.	.	60	.	.	.	.	.	.	.												.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		C	P	F	H	N	E	K	T	P	S	F	T	V	N	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	Y	H	C	F	G	C	G	A	H	.	.	.	.	.	.	.	.	.	.	.	G	N	A	I	D	F	L	M	N	Y	D	K	.	L	E	F	V	E	T	V	E	E	L	A	A	M	H	N
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		C	P	V	C	H	Q	G	E	M	V	S	G	I	K	D	I	P	Y	T	F	R	G	R	K	T	V	L	K	G	I	H	G	L	Y	C	V	H	C	E	E	S	I	M	N	K	E	E	S	D	A	F	M	A	Q	V	K	A	F	R	A	S	V	N	A	E	T	V	A	P	E	F	I	V	K	V	R	K	K	L	S
Template Known Secondary structure			T	T	T	S	S	S	B													T	T														T	T	T																											T	S													T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		95	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		83	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions