Job Description P0ABS5 Confidence 37.26% Date Thu Jan 5 11:16:14 GMT 2012 Rank 82 Aligned Residues 32 % Identity 25% Template c2pdtD_ PDB info PDB header:circadian clock protein Chain: D: PDB Molecule:vivid pas protein vvd; PDBTitle: 2.3 angstrom structure of phosphodiesterase treated vivid Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	V	T	N	D	Q	G	R	S	Y	D	R	F	R	E	R	V	M	F	P	I	R	D	K	R	G	R	V	I	G	F	G	G
Query Conservation
Alig confidence																	.	.
Template Conservation																	.	.
Template Sequence		V	V	N	F	K	K	N	G	Q	R	F	V	N	F	L	.	.	T	M	I	P	V	R	D	E	T	G	E	Y	R	Y	S	M	G
Template Known Secondary structure							T	T									.	.								T	T	S	S
Template Predicted Secondary structure																	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions