Job Description P0ABS5 Confidence 99.93% Date Thu Jan 5 11:16:14 GMT 2012 Rank 6 Aligned Residues 184 % Identity 23% Template c1q57G_ PDB info PDB header:transferase Chain: G: PDB Molecule:dna primase/helicase; PDBTitle: the crystal structure of the bifunctional primase-helicase of2 bacteriophage t7 Resolution 3.45 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	P	V	A	T	S	A	R	Q	Y	L	E	K	R	G	L	S	H	E	V	I	A	R	F	A	I	G	F	A	P	P	G	W	D	N	V	L	K	R	F	G	G	N	P	E	N	R	Q	S	L	I	D	A	G	M	L	V	T	N	D	Q	G	R	S	Y	D	R	F	R	E	R	V	M	F	P	I	R	D	K
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	G	E	S	N	G	R	Y	S	A	L	T	A	R	G	I	S	K	E	T	C	Q	K	A	G	Y	W	I	A	K	V	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	Y	Q	V	A	D	Y	R	D	Q
Template Known Secondary structure			B	T	T	B			B				B	T	T	T	T	B									T						B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B										T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																																				.	.	.	.	.	.	110	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.
Query SS confidence																																																																							.	.	.
Query Sequence		R	G	R	V	I	G	F	G	G	R	V	L	G	N	D	T	P	K	Y	L	N	S	P	E	T	D	I	F	H	K	G	R	Q	L	Y	G	L	Y	E	A	Q	Q	D	N	A	E	P	N	R	L	L	V	V	E	G	Y	M	D	V	V	A	L	A	Q	Y	G	I	N	Y	.	.	.	A	V	A	S	L	G	T	S
Query Conservation																																																																							.	.	.
Alig confidence														.											.	.	.	.	.	.											.	.	.	.																											.	.	.
Template Conservation														.											.	.	.	.	.	.											.	.	.	.
Template Sequence		N	G	N	I	V	S	Q	K	V	R	D	K	.	D	K	N	F	K	T	T	G	S	H	.	.	.	.	.	.	K	S	D	A	L	F	G	K	H	L	.	.	.	.	W	N	G	G	K	K	I	V	V	T	E	G	E	I	D	M	L	T	V	M	E	L	Q	D	C	K	Y	P	V	V	S	L	G	H	G	A	S
Template Known Secondary structure		T	S										T	.	T	T									.	.	.	.	.	.		T	T				T	G	G	G	.	.	.	.		S	S								S	S											T	T	T		S						S	S	T	T	T
Template Predicted Secondary structure														.											.	.	.	.	.	.											.	.	.	.
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		289	290	.	.	.	.				.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		T	T	A	D	H	I	.	.	.	Q	L	L	F	R	A	T	N	N	V	I	C	C	Y	D	G	D	R	A	G	R	D	A	A	W	R	A	L	E	T	A	L	P	Y	M	T	D	G	R	Q	L	R	F	M	F	L	P	D	G	E	D	P	D	T	L	V	R	K	E	G	K	E	A	F	E	A	R	M	E	Q	A
Query Conservation								.	.	.
Alig confidence								.	.	.																															.	.	.						.	.								.
Template Conservation																																									.	.	.						.	.								.
Template Sequence		A	A	K	K	T	C	A	A	N	Y	E	Y	F	D	Q	F	E	Q	I	I	L	M	F	D	M	D	E	A	G	R	K	A	V	E	E	A	A	Q	V	.	.	.	L	P	A	G	K	.	.	V	R	V	A	V	L	P	.	C	K	D	A	N	E	C	H	L	N	G	H	D	R	E	I	M	E	Q	V	W	N	A
Template Known Secondary structure		T							T	T						T										S	S														.	.	.	S		G	G	G	.	.							S	.	S	S	S						S	S	S										S	S
Template Predicted Secondary structure																																									.	.	.						.	.								.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.			.	.	230	.	.	.	.		.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		366	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	P
Template Known Secondary structure			B
Template Predicted Secondary structure
Template SS confidence
		258	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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