Job Description P0ACV2 Confidence 4.85% Date Thu Jan 5 11:19:08 GMT 2012 Rank 96 Aligned Residues 128 % Identity 12% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180
Predicted Secondary structure																																			.	.											.	.	.																							.	.	.	.	.	.	.
Query SS confidence																																			.	.											.	.	.																							.	.	.	.	.	.	.
Query Sequence		L	D	N	L	K	R	A	Q	M	Q	N	R	G	V	M	V	V	G	V	H	F	M	S	L	E	L	G	G	R	V	M	G	L	.	.	C	Q	P	M	M	A	T	Y	R	P	.	.	.	H	N	N	Q	L	M	E	W	V	Q	T	R	G	R	M	R	S	N	K	A	M	I	.	.	.	.	.	.	.	G	R	N
Query Conservation																																			.	.											.	.	.																							.	.	.	.	.	.	.
Alig confidence																																			.	.											.	.	.																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	T	A	G	S	I	N	A	Q	K	I	K	A	A	R	R	D	F	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N
Template Known Secondary structure											T	T								S	S	S														S									T	T	G	G	G	T			S														T	S								S	S		B
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		181	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		N	L	R	G	I	V	G	A	L	K	K	.	.	.	G	E	A	V	W	F	A	P	D	Q	D	Y	G	R	K	G	S	S	F	A	P	F	F	A	V	E	N	V	A	T	T	N	G	T	Y	V	L	S	R	L	S	G	A	A	M	L	T	V	T
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I	S	R	D	L	K	K	M	A	R	E	L	D	V	V	V	I	A	L	S
Template Known Secondary structure														S		S	S									S	S	S	S	B		S		S	S	S																					T
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions