Job Description P31474 Confidence 85.61% Date Thu Jan 5 11:48:02 GMT 2012 Rank 6 Aligned Residues 208 % Identity 10% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	D	L	F	K	T	R	T	F	S	I	G	I	V	G	N	I	A	T	R	L	G	T	G	C	V	P	F	L	M	P	L	M	L	Q	V	G	F	G	Y	Q	A	F	I	A	G	C	M	M	A	P	T	A	L	G	S	I	I	A	K	S	M	V	T	Q	V	L	R	R	L	G	Y	R	H	T	L	V	G	I
Query Conservation
Alig confidence																																																																								.	.
Template Conservation																																																																								.	.
Template Sequence		T	A	A	Q	R	A	Q	P	I	E	S	D	A	T	S	D	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	.	.	G	K	A	S	I	V	D	M
Template Known Secondary structure							T	S																													T	T	S		G	G	G																											T	T	.	.	T
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	I	I	G	L	M	I	A	Q	F	S	L	Q	S	P	A	M	A	I	W	M	L	I	L	P	L	F	I	L	G	M	A	M	S	T	Q	F	T	A	M	N	T	I	T	L	A	D	L	T	D	D	N	A	S	S	G	N	S	V	L	A	V	T	Q	Q	L	S	I	S	L	G	V	A	V	S	A	A	V	L
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		A	N	A	A	L	A	G	G	V	A	I	G	S	V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	.	.	.	.
Template Known Secondary structure					T	T							T	T	T	T	T	T	S																						T									S					T	T						T	T														S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	Y	E	G	M	E	G	T	T	T	V	E	Q	F	H	Y	T	F	I	T	M	G	I	I	T	V	A	S	A	A	M	F	M	L	L	K	T	T	D	G	N	N	L	I	K	R	Q	R	K	S	K	P	N	R	V	P	S	E	S	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	P	G	I	A	V	A	Q	L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E
Template Known Secondary structure		.	.	.	.	.	.	.	T	T																													T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions