Job Description P31474 Confidence 2.96% Date Thu Jan 5 11:48:02 GMT 2012 Rank 30 Aligned Residues 129 % Identity 10% Template c2w8aC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:glycine betaine transporter betp; PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate Resolution 3.35 Å

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		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	A	Q	F	S	L	Q	S	P	A	M	A	I	W	M	L	I	L	P	L	F	I	L	G	M	A	M	S	T	Q	F	T	A	M	N	T	I	T	L	A	D	L	T	D	D	N	A	S	S	G	N	S	V	L	A	V	T	Q	Q	L	S	I	S	L	G	V	A	V	S	A	A	V	L	R	V	Y	E	G	M
Query Conservation
Alig confidence																																																			.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.
Template Sequence		Q	L	F	G	L	L	H	A	L	P	G	G	Q	I	X	G	I	I	A	X	I	L	L	G	T	F	F	I	T	S	A	D	S	A	S	T	V	X	G	T	X	S	Q	H	G	Q	L	E	A	.	.	.	.	.	.	N	K	W	V	T	A	A	W	G	V	A	T	A	A	I	G	L	T	L	L	L	S	G	G	D
Template Known Secondary structure									T	S	T	T																															T	T	T	T		S	S		.	.	.	.	.	.																								G	G
Template Predicted Secondary structure																																																			.	.	.	.	.	.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.							.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		E	G	T	T	T	V	E	Q	F	H	Y	T	F	I	T	.	M	G	I	I	T	V	A	S	A	A	M	F	M	L	L	K	T	T	D	G	N	N	L	I	K	R	Q	R	K	S	K	P	N	R	V	P	S	E	S	E
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		N	A	L	S	N	L	Q	N	V	T	I	V	A	A	T	P	F	L	F	V	V	I	G	L	X	F	A	L	V	K	D	L	S	N	D	V	I	Y	L	E	Y	R	E	Q	Q	R	F	N	A	R	L	A	R	E	R	R
Template Known Secondary structure		G																																	T
Template Predicted Secondary structure
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions