Return to main results Retrieve Phyre Job Id

Job DescriptionP31474
Confidence3.84%DateThu Jan 5 11:48:02 GMT 2012
Rank23Aligned Residues80
% Identity10%Templatec2oarA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: mechanosensitive channel of large conductance (mscl)
Resolution3.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   391........400.........410... ......420.........430.........440.........450.........460...
Predicted Secondary structure  .......












Query SS confidence 






















. . . . . . .

















































Query Sequence  GNSVLAVTQQLSISLGVAVSAAV. . . . . . . LRVYEGMEGTTTVEQFHYTFITMGIITVASAAMFMLLKTTDGNNLIKRQR
Query Conservation    
       

  

  
 
 
.......                   
                              
Alig confidence 






















.......

















































Template Conservation 
 

  

 


 







 
                    
 

 

 
 
 




  
 
 

   
        
Template Sequence  GTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEV
Template Known Secondary structure 







TTT

S

TTT

Template Predicted Secondary structure 


















Template SS confidence 















































































   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   464.....470
Predicted Secondary structure 






Query SS confidence 






Query Sequence  KSKPNRV
Query Conservation         
Alig confidence 






Template Conservation         
Template Sequence  EQPGDTQ
Template Known Secondary structure 

Template Predicted Secondary structure 





Template SS confidence 






   104.....110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions