Job Description P31474 Confidence 2.67% Date Thu Jan 5 11:48:02 GMT 2012 Rank 31 Aligned Residues 154 % Identity 10% Template c2b2hA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter; PDBTitle: ammonium transporter amt-1 from a. fulgidus (as) Resolution 1.54 Å

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		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	T	Q	V	L	R	R	L	G	Y	R	H	T	L	V	G	I	T	V	I	I	G	L	M	I	A	Q	F	S	L	Q	S	P	A	M	A	I	W	M	L	I	L	P	L	F	I	L	G	M	A	M	S	T	Q	F	T	A	M	N	T	I	T	L	A	D	L	T	D	D	N	A	S	S	G	N	S	V	L	A
Query Conservation
Alig confidence																																																													.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		F	V	W	M	V	I	G	W	I	K	G	K	P	G	S	L	G	I	V	S	G	A	I	A	G	L	A	A	I	T	P	A	A	G	F	V	D	V	K	G	A	I	V	I	G	L	V	A	G	I	V	C	Y	L	A	M	D	F	R	.	.	.	.	.	I	K	K	K	I	D	E	S	L	D	A	W	A	I	H	G
Template Known Secondary structure												S																			T	T	T	T	T	T																									.	.	.	.	.			T	T				T	T
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.				.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		V	T	Q	Q	L	S	I	S	L	G	V	A	V	S	A	A	V	L	R	V	Y	E	G	M	E	G	T	T	.	.	.	T	V	E	Q	F	H	Y	T	F	I	T	M	G	I	I	T	V	A	S	A	A	M	F	M	L	L	K	T	T	D	G	N	N	L	I	K	R	Q	R	K	S	K	P	N	R	V	P	S	E
Query Conservation																														.	.	.
Alig confidence																														.	.	.
Template Conservation
Template Sequence		I	G	G	L	W	G	S	V	A	V	G	I	L	A	N	P	E	V	N	G	Y	A	G	L	L	F	G	N	P	Q	L	L	V	S	Q	L	I	A	V	A	S	T	T	A	Y	A	F	L	V	T	L	I	L	A	K	A	V	D	A	A	V	G	L	R	V	S	S	Q	E	E	Y	V	G	L	D	L	S	Q	H	E
Template Known Secondary structure																					S				G	G	G	T																																		T		S	B
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		474	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		387	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions