Return to main results Retrieve Phyre Job Id

Job DescriptionP75974
Confidence86.09%DateThu Jan 5 12:16:42 GMT 2012
Rank125Aligned Residues40
% Identity15%Templated1mkma1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Transcriptional regulator IclR, N-terminal domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20 .........30.........40.
Predicted Secondary structure 




..



Query SS confidence 



















. .




















Query Sequence  MKTIHDIRRSNARKLRDGVG. . GNSSFATMIDREPTQTSRFMG
Query Conservation 
 
  


   

 
    
..

  

   

  
 

    
Alig confidence 








.









..




















Template Conservation 
 

 
 
 .

  
       
  


  

   

  
 
 
Template Sequence  MNTLKKAFE. ILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMV
Template Known Secondary structure 
TT.
SS
B
TT

Template Predicted Secondary structure 
.








Template SS confidence 










































   1........ 10.........20.........30.........40..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions