 |
Job Description | P75974 | Confidence | 67.64% | Date | Thu Jan 5 12:16:42 GMT 2012 |
Rank | 241 | Aligned Residues | 46 |
% Identity | 15% | Template | c3t1bB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:transcriptional regulator, lysr family; |
PDBTitle: crystal structure of the full-length aphb n100e variant
|
Resolution | 2.70 Å |
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | R | R | S | N | A | R | K | L | R | D | G | V | G | G | N | S | S | F | A | T | M | I | D | R | E | P | T | Q | T | S | R | F | M | G | D | G | A | T | K | N | I | G | D | S | M | A | R | H | I | E | K | C | F | D | L | P | V |
Query Conservation |   |
|
|
|   |   |   |
|
|   |
|   |   |   |   |
|
|
|   |   |
|
|   |   |   |
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |
|   |   |
|   |   |   |
|
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
|
|   |   |
|
|   |   |
|
Template Sequence |   |
K | L | D | D | L | N | L | F | R | L | V | V | E | N | G | S | Y | T | S | T | S | K | K | T | M | I | P | V | A | T | I | T | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | I | Q | A | L | E | D | S | L | N | L | R | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T |
|
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|