Job Description P75974 Confidence 98.31% Date Thu Jan 5 12:16:42 GMT 2012 Rank 59 Aligned Residues 75 % Identity 12% Template c3fymA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: the 1a structure of ymfm, a putative dna-binding membrane2 protein from staphylococcus aureus Resolution 1.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																					.																															.	.	.	.
Query SS confidence																					.																															.	.	.	.
Query Sequence		K	T	I	H	D	I	R	R	S	N	A	R	K	L	R	D	G	V	G	.	G	N	S	S	F	A	T	M	I	D	R	E	P	T	Q	T	S	R	F	M	G	D	G	A	T	K	N	I	G	D	.	.	.	.	S	M	A	R	H	I	E	K	C	F	D	L	P	V	G	W	L	D	Q	E	H	Q	T	T	N	I
Query Conservation																					.																															.	.	.	.
Alig confidence							.	.	.	.											.																															.	.	.	.
Template Conservation							.	.	.	.
Template Sequence		K	T	V	G	E	.	.	.	.	A	L	K	G	R	R	E	R	L	G	M	T	L	T	E	L	E	Q	R	T	G	I	K	R	E	M	L	V	H	I	E	N	N	E	F	D	Q	L	P	N	K	N	Y	S	E	G	F	I	R	K	Y	A	S	V	V	N	I	E	P	N	Q	L	I	Q	A	H	Q	D	E	I	P
Template Known Secondary structure							.	.	.	.									T	T																						T	T		G	G	G	S	S	S	G	G	G												T	T										T	T	T	T	S
Template Predicted Secondary structure							.	.	.	.
Template SS confidence
		1002	.	.	.	.					.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.
		77	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	N	Q	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1078	.	1080	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions