Job Description P75974 Confidence 99.95% Date Thu Jan 5 12:16:42 GMT 2012 Rank 3 Aligned Residues 126 % Identity 33% Template c2hnfA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:repressor protein ci101-229dm-k192a; PDBTitle: structure of a hyper-cleavable monomeric fragment of phage2 lambda repressor containing the cleavage site region Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		K	Q	I	T	L	V	P	V	I	S	W	V	Q	A	G	A	W	K	E	V	G	Y	S	E	V	D	L	S	T	A	E	T	Y	P	C	P	V	P	C	G	E	M	T	Y	I	L	R	V	I	G	D	S	M	.	.	.	I	D	E	Y	R	P	G	D	M	I	F	V	D	P	E	V	P	A	C	H	G	D	D	V
Query Conservation																																																							.	.	.
Alig confidence																																																							.	.	.
Template Conservation
Template Sequence		S	H	M	Y	E	Y	P	V	F	S	H	V	Q	A	G	M	F	S	P	E	L	R	T	F	T	K	G	D	A	E	R	W	V	S	T	T	K	K	A	S	D	S	A	F	W	L	E	V	E	G	N	S	M	T	T	P	K	T	S	F	P	D	G	M	L	I	L	V	D	P	E	Q	A	V	E	P	G	D	F	C
Template Known Secondary structure															S	S	S	S		T	T						S	S									S					T	T								S	S	T	T									T	T							T	T	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	L	M	H	D	T	G	E	T	T	F	K	R	L	I	E	D	G	T	Q	R	Y	L	K	A	L	N	P	N	W	P	E	P	Y	I	K	I	N	G	N	C	S	I	I	G	T	V	I	F	S	G
Query Conservation
Alig confidence					.																																		.	.
Template Conservation					.																																		.	.
Template Sequence		I	A	R	.	L	G	G	D	E	F	T	F	A	K	L	I	R	D	S	G	Q	V	F	L	Q	P	L	N	P	Q	Y	P	M	I	P	C	N	.	.	E	S	C	S	V	V	G	K	V	I	A	S	Q
Template Known Secondary structure					.		T	T	T											T	T							S	S	T	T	S						S	.	.	T	T
Template Predicted Secondary structure					.																																		.	.
Template SS confidence
		181	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions