 |
Job Description | P71241 | Confidence | 45.11% | Date | Thu Jan 5 12:12:36 GMT 2012 |
Rank | 418 | Aligned Residues | 93 |
% Identity | 14% | Template | d2dlda1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Formate/glycerate dehydrogenases, NAD-domain
|
Resolution | 2.70 |
|
 |
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
. | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | T | S | I | G | L | V | V | C | R | S | C | I | R | I | G | A | G | W | L | R | N | H | G | Y | N | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
R | M | V | A | V | A | G | D | L | A | A | G | Q | M | L | M | E | S | F | R | N | Q | P | W | L | G | F | E | V | V | G | V | Y | H | . |
D | P | K | P | G | G | V | S |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
| . |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|   | . | . | . |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
H | A | A | I | Q | A | A | R | V | L | R | Q | D | K | R | M | D | E | K | M | A | K | R | D | L | R | W | A | P | T | I | G | R | E | V | R | D | Q | V | V | G | V | V | G | T | G | H | I | G | Q | V | F | M | R | I | M | E | . |
. |
. |
G | F | G | A | K | V | I | A | Y | D | I | F | K | N | P | E | L | E | K | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| S | S |
|
|
|
|
| G | G | G | S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  | T |
|  |  |  |  |  |
| S | S |
|
| T | T | G | G | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
|
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
  |
  |   |
187 | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | D | W | A | G | N | L | Q | Q | L | V | E | D | A | K | A | G | K | I | H | N | V | Y | I | A | M | Q | M | C | D | G |
Query Conservation |   |
  |   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|   |
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |
|
| . | . | . | . | . |
|   |   |
|
|
|
|   |   |   |   |
|
|
|   |   |
Template Sequence |   |
G | Y | Y | V | D | S | L | D | D | L | . |
. |
. |
. |
. |
Y | K | Q | A | D | V | I | S | L | H | V | P | D | V | P | A |
Template Known Secondary structure |   |
T |
| B |
| S |
|  |  |  |  | . | . | . | . | . | T | T | T |
| S |  |  |  |  |
| S |
|
|
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |
|
|  |  |  |  | . | . | . | . | . |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
187 | . | . | 190 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|