 |
Job Description | P71241 | Confidence | 42.50% | Date | Thu Jan 5 12:12:36 GMT 2012 |
Rank | 449 | Aligned Residues | 71 |
% Identity | 21% | Template | d1b93a_ |
SCOP info | Methylglyoxal synthase-like
| Methylglyoxal synthase-like
| Methylglyoxal synthase, MgsA
|
Resolution | 1.90 |
|
 |
  |   |
149 | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
|
|
|
. | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
V | A | G | D | L | A | A | G | Q | M | L | M | E | S | F | R | N | Q | P | W | L | G | F | E | V | V | G | V | Y | H | D | P | K | P | G | G | V | S | N | D | W | A | G | N | L | Q | Q | L | V | E | D | A | K | A | G | K | I | H | N | V | Y | I | A | M | Q | M | C | D | G | . |
. |
. |
. |
A | R | V | K | K | L | V |
Query Conservation |   |
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|   |
|   |   |   |   | . | . | . | . |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|   |   |
|   |
|   |   | . | . | . | . | . | . |
|
|   |
|   |   |   |   |
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|
|
|
|   |
|
|
|   |   |   |
|
|   |
|
|
|   |
|
|
|
Template Sequence |   |
L | Y | A | T | G | T | T | G | N | L | I | S | R | A | T | . |
. |
. |
. |
. |
. |
G | M | N | V | N | A | M | L | S | G | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
M | G | G | D | Q | Q | V | G | A | L | I | S | E | G | K | I | D | V | L | I | F | F | W | D | P | L | N | A | V | P | H | D | P | D | V | K | A | L | L |
Template Known Secondary structure |   |
 |  |  |  | T | T |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|
|
|  |  |  |
|
| G | G | . | . | . | . | . | . | . | . | . | G | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |
|
| T | T | S |
|
| T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
  |   |
225 | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | Q | L | A | D | T | T | C | S | V |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|
|
|
|
Template Sequence |   |
R | L | A | T | V | W | N | I | P | V |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|