 |
Job Description | P71241 | Confidence | 41.20% | Date | Thu Jan 5 12:12:36 GMT 2012 |
Rank | 462 | Aligned Residues | 63 |
% Identity | 21% | Template | c3pdiB_ |
PDB info |
PDB header:protein binding | Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; |
PDBTitle: precursor bound nifen
|
Resolution | 2.40 Å |
|
 |
  |   |
144 | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | R | M | V | A | V | A | G | D | L | A | A | G | Q | M | L | M | E | S | F | R | N | Q | P | W | L | G | F | E | V | V | G | V | Y | H | D | P | K | P | G | G | . |
. |
. |
. |
. |
V | S | N | D | W | A | G | N | L | Q | Q | L | V | E | D | A | K | A | G | K | I | H | N | V | Y |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   | . | . | . | . | . |   |   |   |   |
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   | . | . | . |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|
|
|
|
|
Template Sequence |   |
S | A | R | T | A | I | A | A | D | P | D | L | L | L | G | F | D | A | L | L | R | . |
. |
. |
S | M | G | A | H | T | V | A | A | V | V | P | A | R | A | A | A | L | V | D | S | P | L | P | S | V | R | V | G | D | L | E | D | L | E | H | A | A | R | A | G | Q | A | Q | L | V | I |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T | T |
|  |  |  |  |  |  |  | S | S |
|
| S |
|
| T | T | T | T | S | S |
|  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
313 | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | |
|
|
. | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|