Return to main results Retrieve Phyre Job Id

Job DescriptionP71241
Confidence49.53%DateThu Jan 5 12:12:36 GMT 2012
Rank381Aligned Residues88
% Identity16%Templatec3k96B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: 2.1 angstrom resolution crystal structure of glycerol-3-phosphate2 dehydrogenase (gpsa) from coxiella burnetii
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170........ .180.........190.........200.....
Predicted Secondary structure 










..................














Query SS confidence 


































. . . . . . . . . . . . . . . . . .


























Query Sequence  KRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYH. . . . . . . . . . . . . . . . . . DPKPGGVSNDWAGNLQQLVEDAKAGKI
Query Conservation    







     
   
         


 

..................
         


    
   
    
Alig confidence 






















...








..................

















.....



Template Conservation    

 




  
   
  
   ...
  
    
       
   
                        .....    
Template Sequence  KHPIAILGAGSWGTALALVLARK. . . GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKAS. . . . . LEGV
Template Known Secondary structure 
S


STT...T


S
SSBTTTBTT



TTS
.....TT
Template Predicted Secondary structure 





...






















.....


Template SS confidence 















































































   5....10.........20....... ..30.........40.........50.........60.........70.. ....
 
   206...210.........220.........230.........
Predicted Secondary structure 











Query SS confidence 

































Query Sequence  HNVYIAMQMCDGARVKKLVHQLADTTCSVLLIPD
Query Conservation 
 



 
         

  
   

 
  

 
Alig confidence 

































Template Conservation 
 

  

          
         

   
Template Sequence  TDILIVVPSFAFHEVITRMKPLIDAKTRIAWGTK
Template Known Secondary structure 



TTT

TT



Template Predicted Secondary structure 










Template SS confidence 

































   77..80.........90.........100.........110
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions