Job Description P71241 Confidence 65.67% Date Thu Jan 5 12:12:36 GMT 2012 Rank 249 Aligned Residues 81 % Identity 16% Template c3g13B_ PDB info PDB header:recombination Chain: B: PDB Molecule:putative conjugative transposon recombinase; PDBTitle: crystal structure of putative conjugative transposon recombinase from2 clostridium difficile Resolution 2.00 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.				.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		Q	M	L	M	E	S	F	R	N	Q	P	W	L	G	F	E	V	V	G	V	Y	H	D	P	K	P	G	G	V	S	N	D	W	A	G	N	L	Q	Q	L	V	E	D	A	K	A	G	K	I	H	N	V	Y	I	A	M	Q	.	.	.	M	C	D	G	A	R	V	K	K	L	V	H	Q	L	A	D	T	T	C	S
Query Conservation																																																											.	.	.
Alig confidence													.	.																																													.	.	.
Template Conservation													.	.
Template Sequence		Q	Y	Y	T	D	X	I	K	K	N	K	.	.	E	W	V	L	A	D	I	Y	A	D	E	A	I	T	G	T	Q	V	T	K	R	E	D	F	Q	R	X	I	N	D	C	X	N	G	E	I	D	X	V	F	T	K	S	I	S	R	F	A	R	N	T	L	D	T	L	K	Y	V	R	X	L	K	E	R	N	I	A
Template Known Secondary structure										T		T	.	.	T											B		T	T	S	S		B														T	T			S					S		G	G	G	S	S	S	S														T	T
Template Predicted Secondary structure													.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		234	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	I	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	F	E	D	E
Template Known Secondary structure					T	T	T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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