Return to main results Retrieve Phyre Job Id

Job DescriptionP71241
Confidence57.12%DateThu Jan 5 12:12:36 GMT 2012
Rank314Aligned Residues51
% Identity10%Templatec3cpqB_
PDB info PDB header:ribosomal proteinChain: B: PDB Molecule:50s ribosomal protein l30e; PDBTitle: crystal structure of l30e a ribosomal protein from2 methanocaldococcus jannaschii dsm2661 (mj1044)
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   187..190.........200.........210.........220.........230........
Predicted Secondary structure 

















Query SS confidence 



















































Query Sequence  NDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGARVKKLVHQLADTTCSVLLIP
Query Conservation    


    
   
    

 



 
         

  
   

 
  

Alig confidence 



























.






















Template Conservation 



 
   
 


   
 





 
 .       
        

     
Template Sequence  GKVILGSKRTIKFVKHGEGKLVVLAGNI. PKDLEEDVKYYAKLSNIPVYQHK
Template Known Secondary structure  SSTT

S
TT
.
TT



Template Predicted Secondary structure 








.





Template SS confidence 



















































   20.........30.........40....... ..50.........60.........70
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions