Job Description P71241 Confidence 55.00% Date Thu Jan 5 12:12:36 GMT 2012 Rank 333 Aligned Residues 67 % Identity 18% Template c2zkr6_ PDB info PDB header:ribosomal protein/rna Chain: 6: PDB Molecule:60s ribosomal protein l30e; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	G	Q	M	L	M	E	S	F	R	N	Q	P	W	L	G	F	E	V	V	G	V	Y	H	D	P	K	P	G	G	V	S	N	D	W	A	G	N	L	Q	Q	L	V	E	D	A	K	A	G	K	I	H	N	V	Y	I	A	M	Q	M	C	D	G	A	R	V	K	K	L	V	H	Q	L	A	D	T	T	C	S
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		K	S	L	E	S	I	N	S	R	L	Q	L	V	M	K	S	G	K	Y	V	L	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	T	L	K	M	I	R	Q	G	K	A	K	L	V	I	L	A	N	N	C	.	P	A	L	R	K	S	E	I	E	Y	Y	A	M	L	A	K	T	G
Template Known Secondary structure																		T					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T									T	T		.		S	S	T	T	T										T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.																		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		234	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	L	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	H	Y	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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