Job Description P71241 Confidence 56.01% Date Thu Jan 5 12:12:36 GMT 2012 Rank 324 Aligned Residues 76 % Identity 14% Template c2xznU_ PDB info PDB header:ribosome Chain: U: PDB Molecule:ribosomal protein l7ae containing protein; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	L	A	A	G	Q	M	L	M	E	S	F	R	N	Q	P	W	L	G	F	E	V	V	G	V	Y	H	D	P	K	P	G	G	V	S	N	D	W	A	G	N	L	Q	Q	L	V	E	D	A	K	A	G	K	I	H	N	V	Y	I	A	M	Q	M	C	D	G	A	R	V	K	K	L	V	H	Q	L	A	D	T
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	Q	Q	L	N	E	V	L	A	K	V	I	K	S	S	N	C	Q	D	A	I	S	K	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	V	L	R	T	I	E	A	K	Q	A	L	F	V	C	V	A	E	D	C	D	Q	G	N	Y	V	K	L	V	K	A	L	C	A	K	N
Template Known Secondary structure			T												T	T	T	T	S	S	S					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T			S						S	S			S	T	T												T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	S	V	L	L	I	P	D	V	F	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	K	Y	V	S	V	P	K	R	A	S	L
Template Known Secondary structure		T							S		S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions