Job Description P71241 Confidence 46.41% Date Thu Jan 5 12:12:36 GMT 2012 Rank 409 Aligned Residues 43 % Identity 21% Template c2v1dA_ PDB info PDB header:oxidoreductase/repressor Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: structural basis of lsd1-corest selectivity in histone h32 recognition Resolution 3.10 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.																.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	I	R	I	G	A	G	W	L	R	N	H	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	R	M	V	A	V	A	G	D	L	A	A	G	Q	M	L	M	E	S	F	R	N	Q	P	W	L	G	F	E	V	V
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																																							.	.	.
Template Sequence		L	V	H	R	V	H	S	Y	L	E	R	H	G	L	I	N	F	G	I	Y	K	R	I	K	P	L	P	T	K	K	T	G	K	V	I	I	I	G	S	G	V	S	G	L	A	A	A	R	Q	L	Q	S	F	.	.	.	G	M	D	V	T
Template Known Secondary structure													T	T	S	S	S		S	S		B		S	S				S	S			S								S													T	.	.	.	T
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300				.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions