Return to main results Retrieve Phyre Job Id

Job DescriptionP71241
Confidence85.95%DateThu Jan 5 12:12:36 GMT 2012
Rank139Aligned Residues91
% Identity11%Templatec2pn1A_
PDB info PDB header:ligaseChain: A: PDB Molecule:carbamoylphosphate synthase large subunit; PDBTitle: crystal structure of carbamoylphosphate synthase large subunit (split2 gene in mj) (zp_00538348.1) from exiguobacterium sp. 255-15 at 2.00 a3 resolution
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160.........170.........180..... ....190.. .......200.........210
Predicted Secondary structure 




















.......




...



Query SS confidence 












































. . . . . . .






. . .

















Query Sequence  GYNKRMVAVAGDLAAGQMLMESFRNQPWLGFEVVGVYHDPKPGGV. . . . . . . SNDWAGN. . . LQQLVEDAKAGKIHNVYI
Query Conservation 
    







     
   
         


 


      .......   


 ...   
   
    

 


Alig confidence 















.












.













.......






...













.


Template Conservation     
 



   
   . 

          . 

  
     
     
    

       

 
  
     

. 

Template Sequence  GXQKPHLLITSAGRRA. KLVEYFVKEFKTG. RVSTADCSPLASALYXADQHYIVPKIDEVEYIDHLLTLCQDEGVT. ALL
Template Known Secondary structure 
TT

S
TT
.

SS.S
TT
GGGGGSSS


TTSTTT

.
Template Predicted Secondary structure 







.



.

















.
Template SS confidence 















































































   0.........10..... ....20........ .30.........40.........50.........60.........70... ...
 
   211........220.........230....
Predicted Secondary structure 







Query SS confidence 























Query Sequence  AMQMCDGARVKKLVHQLADTTCSV
Query Conservation 
 
         

  
   

 
Alig confidence 























Template Conservation 
  
      
         
   
Template Sequence  TLIDPELGLLAQATERFQAIGVTV
Template Known Secondary structure  SSTTTT
Template Predicted Secondary structure 





Template SS confidence 























   77..80.........90.........100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions