Job Description P71241 Confidence 85.95% Date Thu Jan 5 12:12:36 GMT 2012
Rank 139 Aligned Residues 91
% Identity 11% Template c2pn1A_
PDB info
PDB header: ligaseChain: A: PDB Molecule: carbamoylphosphate synthase large subunit;
PDBTitle: crystal structure of carbamoylphosphate synthase large subunit (split2 gene in mj) (zp_00538348.1) from exiguobacterium sp. 255-15 at 2.00 a3 resolution
Resolution 2.00 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
141 . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
G Y N K R M V A V A G D L A A G Q M L M E S F R N Q P W L G F E V V G V Y H D P K P G G V .
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S N D W A G N .
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L Q Q L V E D A K A G K I H N V Y I
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
G X Q K P H L L I T S A G R R A .
K L V E Y F V K E F K T G .
R V S T A D C S P L A S A L Y X A D Q H Y I V P K I D E V E Y I D H L L T L C Q D E G V T .
A L L
Template Known Secondary structure  
T T S T T . S S . S T T G G G G G S S S T T S T T T .
Template Predicted Secondary structure  
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Template SS confidence  
   
0 . . . . . . . . . 10 . . . . .
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. 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . .
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211 . . . . . . . . 220 . . . . . . . . . 230 . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
A M Q M C D G A R V K K L V H Q L A D T T C S V
Query Conservation  
                               
Alig confidence  
Template Conservation  
                                       
Template Sequence  
T L I D P E L G L L A Q A T E R F Q A I G V T V
Template Known Secondary structure  
S S T T T T
Template Predicted Secondary structure  
Template SS confidence  
   
77 . . 80 . . . . . . . . . 90 . . . . . . . . . 100
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]