Job Description P71241 Confidence 49.57% Date Thu Jan 5 12:12:36 GMT 2012 Rank 380 Aligned Residues 87 % Identity 11% Template c2i80B_ PDB info PDB header:ligase Chain: B: PDB Molecule:d-alanine-d-alanine ligase; PDBTitle: allosteric inhibition of staphylococcus aureus d-alanine:d-alanine2 ligase revealed by crystallographic studies Resolution 2.19 Å

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		144	.	.	.	.	.	150	.	.	.	.	.										.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	M	V	A	V	A	G	D	L	A	A	.	.	.	.	.	.	.	.	.	G	Q	M	L	M	E	S	F	R	N	Q	P	W	L	G	F	E	V	V	G	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	P	K	P	G	G	V	S	N	D	W	A	G	N	L	Q	Q	L
Query Conservation														.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.												.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.
Template Sequence		K	E	N	I	C	I	V	F	G	G	K	S	A	E	H	E	V	S	I	L	T	A	Q	N	V	L	N	A	I	D	K	D	.	.	.	K	Y	H	V	D	I	I	Y	I	T	N	D	G	D	W	R	K	Q	N	N	I	T	A	E	I	K	S	T	D	E	L	H	L	E	N	G	E	A	L	E	I	S	Q	L	L
Template Known Secondary structure												S	S	T	T															S		T	T	.	.	.	T										T	T	S										S					G	G	G	G	S		S					S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	D	A	K	A	G	K	I	H	N	V	Y	I	A	M	Q	M	C	D	G	A	R	V	K	K	L	V	H	Q	L	A	D	T	T	C	S	V
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		K	E	S	S	S	G	Q	P	Y	D	A	V	F	P	L	L	H	G	P	N	G	E	D	G	.	T	I	Q	G	L	F	E	V	L	D	V	P	Y
Template Known Secondary structure					T	T	S	S			S						S		B	T	T	T	B	S	S	.										T			B
Template Predicted Secondary structure																										.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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