Job Description P71241 Confidence 98.09% Date Thu Jan 5 12:12:36 GMT 2012 Rank 3 Aligned Residues 105 % Identity 14% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		N	K	R	M	V	A	V	A	G	D	L	A	A	G	Q	M	L	M	E	S	F	R	N	Q	P	W	L	G	F	E	V	V	G	V	Y	H	D	P	K	P	G	G	V	.	.	.	.	S	N	D	W	A	G	N	L	Q	Q	L	V	E	D	A	K	A	G	K	I	H	N	V	Y	I	A	M	Q	M	C	D	G	A
Query Conservation																																													.	.	.	.
Alig confidence																											.	.																	.	.	.	.							.												.										.	.	.
Template Conservation																											.	.																											.												.										.	.	.
Template Sequence		R	K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	.	.	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	R	G	G	V	I	E	H	.	V	D	L	L	P	Q	R	V	P	G	R	.	I	E	I	A	L	L	T	V	P	.	.	.	R	E
Template Known Secondary structure		S										S										S				S	.	.	S									S		T	T	T	T	T				T	T						.	G	G	G					S	T	T	T	.								S		.	.	.
Template Predicted Secondary structure																											.	.																											.												.										.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.				150	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		R	V	K	K	L	V	H	Q	L	A	D	T	T	C	S	V	L	L	I	.	P	D	V	F	T	F	N	I	L	H	S	R	L	E	E	M	N
Query Conservation																					.
Alig confidence																					.
Template Conservation
Template Sequence		A	A	Q	K	A	A	D	L	L	V	A	A	G	I	K	G	I	L	N	F	A	P	V	V	L	E	V	P	K	E	V	A	V	E	N	V	D
Template Known Secondary structure														T								S	S	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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