Return to main results Retrieve Phyre Job Id

Job DescriptionP71241
Confidence90.63%DateThu Jan 5 12:12:36 GMT 2012
Rank115Aligned Residues88
% Identity13%Templatec1ebuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: homoserine dehydrogenase complex with nad analogue and l-2 homoserine
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   146...150.........160......... 170.........180. ........190.........200.....
Predicted Secondary structure 





.





...................











Query SS confidence 























.











. . . . . . . . . . . . . . . . . . .























Query Sequence  MVAVAGDLAAGQMLMESFRNQPWL. GFEVVGVYHDPK. . . . . . . . . . . . . . . . . . . PGGVSNDWAGNLQQLVEDAKAGKI
Query Conservation 







     
   
      .   


 


  ...................       


    
   
    
Alig confidence 























.











...................























Template Conservation 





 
 

      
          
  
 
                                      

     
Template Sequence  NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTKTLPLDDLIAHLKTSPKP
Template Known Secondary structure 

ST


SS
SSB
TT
S

TTTT



B


TT
SS
Template Predicted Secondary structure 


































Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   206...210.........220.........230......
Predicted Secondary structure 








Query SS confidence 






























Query Sequence  HNVYIAMQMCDGARVKKLVHQLADTTCSVLL
Query Conservation 
 



 
         

  
   

 
  
Alig confidence 







...



















Template Conservation 



  
 ...   
      


 





Template Sequence  VILVDNTS. . . SAYIAGFYTKFVENGISIAT
Template Known Secondary structure 
S
...
TTTT

Template Predicted Secondary structure 



...




Template SS confidence 






























   87..90.... .....100.........110....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions