Job Description Q9JMS5 Confidence 90.63% Date Wed Jan 25 15:21:16 GMT 2012 Rank 28 Aligned Residues 156 % Identity 13% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

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		1586	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	N	N	F	K	A	N	Y	G	V	N	G	F	R	L	T	G	E	V	G	Y	L	K	N	I	G	G	I	Q	P	S	D	F	Y	V	E	P	K	L	Y	L	S	H	T	E	L	S	G	G	V	V	E	D	L	Q	G	G	K	I	T	Y	P	N	S	L	T	I	I	E	P	G	V	F	F	S	Y	R	K	T
Query Conservation
Alig confidence																												.	.	.	.	.	.	.			.	.	.	.
Template Conservation																												.	.	.	.	.	.	.			.	.	.	.
Template Sequence		D	E	K	Q	T	I	G	T	A	D	S	V	G	R	Y	I	G	G	Y	V	A	Y	D	N	G	P	.	.	.	.	.	.	.	L	S	.	.	.	.	A	S	L	G	L	A	Q	Q	K	T	A	V	G	G	L	A	T	D	R	D	E	I	T	L	G	A	S	Y	N	F	G	V	A	K	L	S	G	L	L	Q	Q
Template Known Secondary structure			T	T			B	T	T	B	S	S	T	T												S	S	.	.	.	.	.	.	.			.	.	.	.													T	T																	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.			.	.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.								.	.					.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		1666	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	S	T	S	N	D	E	A	M	F	K	D	Y	I	K	Q	S	V	V	D	A	W	F	G	G	G	Y	S	F	K	T	G	N	Y	S	R	T	N	F	D	S	D	M	V	E	Y	N	T	S	D	N	F	A	L	K	S	G	V	E	F	E	F	L	K	D	A	R	L	L	L	T	S	S	Y	S	I	N	N	D
Query Conservation
Alig confidence																																	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.
Template Sequence		T	K	F	K	R	D	I	G	G	D	I	K	T	N	S	Y	M	L	G	A	S	A	P	V	G	G	V	G	E	V	K	.	.	.	.	.	.	L	Q	Y	A	L	Y	D	Q	K	A	I	D	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	S	K	R	T	A	L	Y	G	N	L	A	F	L	K	N	K	D
Template Known Secondary structure							T	T	S																	T	T	T					.	.	.	.	.	.									G	G	G	T														S	S	S	S														T
Template Predicted Secondary structure																																	.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
																						1746	.	.	.	1750	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	L	S	F	I	L	G	G	N	Y	Y	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R	H	A	F
Template Known Secondary structure		T							B	T	T	T	B		S				T	T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions