 |
Job Description | Q9JMS5 | Confidence | 4.61% | Date | Wed Jan 25 15:21:16 GMT 2012 |
Rank | 100 | Aligned Residues | 74 |
% Identity | 14% | Template | d1vcaa1 |
SCOP info | Immunoglobulin-like beta-sandwich
| Immunoglobulin
| C2 set domains
|
Resolution | 1.80 |
|
 |
  |   |
1603 | . | . | . | . | . | . | 1610 | . | . | . | . | . | . | . | . | . | 1620 | . | . | . | . | . | . | . | . | . | 1630 | . | . | . | . | . | . | . | . | . | 1640 | . | . | . | . | . | . | . | . | . | 1650 | . | . | . | . | . | . | . | . | . | 1660 | . | . | . | . | . | . | . | . | . | 1670 | . | . | . | . | . | . | . | . | . | 1680 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | V | G | Y | L | K | N | I | G | G | I | Q | P | S | D | F | Y | V | E | P | K | L | Y | L | S | H | T | E | L | S | G | G | V | V | E | D | L | Q | G | G | K | I | T | Y | P | N | S | L | T | I | I | E | P | G | V | F | F | S | Y | R | K | T | H | E | S | T | S | N | D | E | A | M | F | K | D | Y | I | K | Q |
Query Conservation |   |
  |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |   |
| . | . | . |
|
|   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . | . | . | . |   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |
Template Sequence |   |
L | E | A | G | K | P | I | T | V | . |
. |
. |
K | C | S | V | A | D | V | Y | P | F | D | R | L | E | I | D | L | L | K | G | D | H | L | M | K | S | Q | E | F | L | E | D | A | D | R | K | S | L | E | T | K | S | L | E | V | . |
. |
. |
. |
T | F | T | P | V | I | E | D | I | G | K | V | L | V | C | R | A | K | L |
Template Known Secondary structure |   |
 |  | T | T | S |
|  |  |  | . | . | . |  |  |  |  |  |  |  | S | S | G | G | G |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| S |
|
| S | S |
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |
|
|
| G | G | G | T | T |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  | . | . | . |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
103 | . | . | . | . | . | . | 110 | . | |
|
|
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
  |
  |   |
1683 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
S |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
H |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
176 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|