Job Description Q9JMS5 Confidence 26.65% Date Wed Jan 25 15:21:16 GMT 2012 Rank 36 Aligned Residues 185 % Identity 21% Template c3rbhC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:alginate production protein alge; PDBTitle: structure of alginate export protein alge from pseudomonas aeruginosa Resolution 2.30 Å

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		1483	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	E	V	Y	D	N	L	K	T	S	Y	S	L	N	T	M	M	I	G	G	D	I	Y	N	W	T	D	G	Y	N	Y	S	H	I	G	I	M	G	G	M	G	S	A	A	N	K	T	T	S	T	N	N	K	R	A	T	G	N	V	D	G	Y	T	L	G	L	Y	H	V	F	Q	Q	N	I	S	D	G	L	N
Query Conservation
Alig confidence																															.	.	.										.	.	.	.																																	.	.	.
Template Conservation																															.	.	.										.	.	.	.																																	.	.	.
Template Sequence		Y	R	T	D	L	D	E	L	A	P	E	D	K	D	R	T	H	V	F	G	D	I	S	T	Q	W	A	P	H	.	.	.	H	R	I	G	V	R	I	H	H	.	.	.	.	A	D	D	S	D	K	T	Y	T	G	Q	L	T	W	L	G	I	E	A	T	G	D	A	Y	N	Y	R	S	S	X	P	L	.	.	.
Template Known Secondary structure			B	T	T			S			T	T	T	T	T														T	T	.	.	.										.	.	.	.							S															S	T	T		T	T		S		S		.	.	.
Template Predicted Secondary structure																															.	.	.										.	.	.	.																																	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.				.	220	.	.	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		1563	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	E	R	Q	G	L	W	T	Y	S	S	I	Q	Y	M	D	Y	D	N	S	V	S	S	T	N	N	F	K	A	N	Y	G	V	N	G	F	R	L	T	G	E	V	G	Y	L	K	N	I	G	G	I	Q	P	S	D	F	Y	V	E	P	K	L	Y	L	S	H	T	E	L	S	G	G	V	V	E	D	L	Q	G
Query Conservation
Alig confidence		.	.	.	.	.																					.	.	.	.	.	.	.							.	.										.	.	.	.	.	.			.	.																					.
Template Conservation		.	.	.	.	.																					.	.	.	.	.	.	.							.	.										.	.	.	.	.	.			.	.																					.
Template Sequence		.	.	.	.	.	N	Y	W	A	S	A	T	W	L	T	G	D	R	D	N	L	T	Q	S	G	.	.	.	.	.	.	.	D	V	N	A	F	G	.	.	V	D	L	G	L	R	W	N	I	.	.	.	.	.	.	D	E	.	.	Q	W	K	A	G	V	G	Y	A	R	G	S	G	G	G	K	D	G	E	E	.
Template Known Secondary structure		.	.	.	.	.																					.	.	.	.	.	.	.							.	.										.	.	.	.	.	.	S	S	.	.	S														S	G	G	G	T	T	.
Template Predicted Secondary structure		.	.	.	.	.																					.	.	.	.	.	.	.							.	.										.	.	.	.	.	.			.	.																					.
Template SS confidence
							273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.								.	.	.	.	.	.			.	300	.	.	.	.	.	.	.							.	.			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		1643	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	I	T	Y	P	N	S	L	T	I	I	E	P	G	V	F	F	S	Y	R	K	T	H	E	S	T	S	N	D	E	A	M	F	K	D	Y	I	K	Q	S	V	V	D	A	W	F	G	G	G	Y	S	F	K	T	G	N	Y	S	R	T	N	F	D	S	D	M	V	E	Y	N	T	S	D	N	F	A	L	K	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	Q	Q	T	G	L	E	S	N	R	S	N	F	T	G	T	R	S	R	V	H	R	F	G	E	A	F	R	G	E	L	S	N	L	Q	A	A	T	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	B							T	T	S	S	S	S				T	T		T	T	T				S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																										343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		1723	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	E	F	E	F	L	K	D	A	R	L	L	L	T	S	S	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	G	S	W	Q	L	R	E	D	Y	D	A	S	L	V	Y	H	K
Template Known Secondary structure								T	T	T
Template Predicted Secondary structure
Template SS confidence
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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