Job Description Q9JMS5 Confidence 98.28% Date Wed Jan 25 15:21:16 GMT 2012 Rank 11 Aligned Residues 141 % Identity 16% Template c3qraA_ PDB info PDB header:cell invasion Chain: A: PDB Molecule:attachment invasion locus protein; PDBTitle: the crystal structure of ail, the attachment invasion locus protein of2 yersinia pestis Resolution 1.80 Å

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		1577	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	M	D	Y	D	N	S	V	S	S	T	N	N	F	K	A	N	Y	G	V	N	G	F	R	L	T	G	E	V	G	Y	L	K	N	I	G	G	I	Q	P	S	D	F	Y	V	E	P	K	L	Y	L	S	H	T	E	L	S	G	G	V	V	E	D	L	Q	G	G	K	I	T	Y	P	N	S	L	T	I	I	E	P
Query Conservation
Alig confidence															.	.	.	.	.																			.	.	.	.	.	.								.	.	.	.	.																				.	.	.	.	.
Template Conservation															.	.	.	.	.																			.	.	.	.	.	.								.	.	.	.	.																				.	.	.	.	.
Template Sequence		Y	A	Q	S	R	V	K	E	D	G	Y	K	L	.	.	.	.	.	D	K	N	P	R	G	F	N	L	K	Y	R	Y	E	F	N	N	D	.	.	.	.	.	.	W	G	V	I	G	S	F	.	.	.	.	.	A	Q	T	R	R	G	F	E	E	S	V	L	I	D	G	D	F	K	Y	.	.	.	.	.	Y	S
Template Known Secondary structure										T	T	S			.	.	.	.	.	B														S	S	S	S	.	.	.	.	.	.								.	.	.	.	.																				.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.																			.	.	.	.	.	.								.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.							.	.	.	70	.	.	.						.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.
		1657	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	F	F	S	Y	R	K	T	H	E	S	T	S	N	D	E	A	M	F	K	D	Y	I	K	Q	S	V	V	D	A	W	F	G	G	G	Y	S	F	K	T	G	N	Y	S	R	T	N	F	D	S	D	M	V	E	Y	N	T	S	D	N	F	A	L	K	S	G	V	E	F	E	F	L	K	D	A	R	L	L	L
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Sequence		V	T	A	G	P	V	F	R	I	N	E	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	L	Y	G	L	L	G	A	G	H	G	.	.	.	.	K	A	K	F	S	S	F	G	Q	S	E	S	R	S	K	T	S	L	A	Y	G	A	G	L	Q	F	N	P	H	P	N	F	V	I	D	A
Template Known Secondary structure											S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																												S	S	T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110																	.	.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		1737	.	.	1740	.	.	.	.	.	.	.	.		.	1750	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		T	S	S	Y	S	I	N	N	D	R	N	L	.	S	F	I	L	G	G	N	Y	Y	F
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		S	Y	E	Y	S	K	L	D	D	V	K	V	G	T	W	M	L	G	A	G	Y	R	F
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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