Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMS5
Confidence9.02%DateWed Jan 25 15:21:16 GMT 2012
Rank58Aligned Residues43
% Identity16%Templatec3emoA_
PDB info PDB header:membrane protein/cell adhesionChain: A: PDB Molecule:hia (adhesin); PDBTitle: crystal structure of transmembrane hia 973-1098
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1715....1720.........1730.........1740.........1750........
Predicted Secondary structure 










Query SS confidence 











































Query Sequence  SDNFALKSGVEFEFLKDARLLLTSSYSINNDRNLSFILGGNYYF
Query Conservation                                              
Alig confidence 









.
































Template Conservation   
  




 .     
         
         





  
Template Sequence  QGQNGLAIGV. SRISDNGKVIIRLSGTTNSQGKTGVAAGVGYQW
Template Known Secondary structure  TT.
TTS
TTS





Template Predicted Secondary structure 



.










Template SS confidence 











































   1056...1060..... ....1070.........1080.........1090........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions