Job Description Q9JMS5 Confidence 100.00% Date Wed Jan 25 15:21:16 GMT 2012 Rank 1 Aligned Residues 262 % Identity 18% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

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		1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.		.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		R	P	E	P	G	A	F	I	N	N	S	K	S	M	L	D	M	.	F	A	L	Q	R	Y	D	I	P	G	Q	H	R	Y	P	T	L	F	E	N	L	Y	N	N	G	M	W	I	Q	F	N	N	N	S	G	S	N	S	E	V	Y	D	N	L	K	T	S	Y	S	L	N	T	M	M	I	G	G	D	I	Y	N	W
Query Conservation																			.
Alig confidence																			.																	.	.	.	.	.																			.	.	.	.	.															.
Template Conservation																																				.	.	.	.	.																			.	.	.	.	.															.
Template Sequence		Q	G	K	A	A	A	T	F	M	H	I	S	Y	N	N	F	I	T	E	V	D	N	L	N	K	R	M	G	D	L	R	D	I	N	.	.	.	.	.	G	E	A	G	T	W	V	R	L	L	N	G	S	G	S	A	D	G	.	.	.	.	.	G	F	T	D	H	Y	T	L	L	Q	M	G	A	D	.	R	K	H
Template Known Secondary structure																				T												T	T			.	.	.	.	.		S															S	T	.	.	.	.	.	T														.
Template Predicted Secondary structure																																				.	.	.	.	.																			.	.	.	.	.															.
Template SS confidence
		1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.						.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.						.	.	.	.	.	.	.	.	1140	.	.	.	.	.		.	.	.
		1509	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.			.	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		T	D	G	Y	N	Y	S	H	I	G	I	M	G	G	M	G	S	A	A	N	K	T	T	S	T	N	N	K	R	A	T	G	N	V	D	G	Y	T	L	G	L	Y	H	V	F	Q	Q	N	I	S	D	G	L	N	E	S	E	R	Q	G	L	W	T	Y	S	S	I	Q	Y	M	D	Y	D	N	S	.	.	V	S	S
Query Conservation																																																																													.	.
Alig confidence																							.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																							.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	G	S	M	D	L	F	T	G	V	M	A	T	Y	T	D	T	D	A	S	.	.	.	.	.	A	D	L	Y	S	G	K	T	K	S	W	G	G	G	F	Y	A	S	G	L	F	R	.	.	.	.	.	.	.	.	.	.	S	G	A	Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	N	F
Template Known Secondary structure				T	T																		.	.	.	.	.		T	T																			T	.	.	.	.	.	.	.	.	.	.	T	S																			S	S
Template Predicted Secondary structure																							.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1149	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.						1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.											.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.
		1587	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	N	F	K	A	N	Y	G	V	N	G	F	R	L	T	G	E	V	G	Y	L	K	N	I	G	G	I	Q	P	S	D	F	Y	V	E	P	K	L	Y	L	S	H	T	E	L	S	G	G	V	V	E	D	L	Q	G	G	K	I	T	Y	P	N	S	L	T	I	I	E	P	G	V	F	F	S	Y	R	K	T	H
Query Conservation
Alig confidence																											.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	A	G	K	Q	N	F	R	S	H	S	L	Y	A	G	A	E	V	G	Y	R	Y	H	L	.	.	.	.	T	D	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	G	Q	N	S	V	N	.	.	.	.	.	.	.	.	.	.	.	.	P	L	V	G	R	T	G	V	V	S	G	K	T	F	S
Template Known Secondary structure		T	T																								.	.	.	.		T	T																						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1214	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.					.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.													.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.
		1667	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	S	T	S	N	D	E	A	M	F	K	D	Y	I	K	Q	S	V	V	D	A	W	F	G	G	G	Y	S	F	K	T	G	N	Y	S	R	T	N	F	D	S	D	M	V	E	Y	N	T	S	D	N	F	A	L	K	S	G	V	E	F	E	F	L	K	D	A	R	L	L	L	T	S	S	Y	S	I	N	N	D	.
Query Conservation																																																																																	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.																																					.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	S	L	T	A	R	A	G	L	H	Y	E	F	D	L	.	.	.	.	.	.	.	.	.	.	T	D	S	R	K	D	S	R	M	L	Y	G	V	G	L	N	A	R	F	G	D	N	T	R	L	G	L	E	V	E	R	S	A	F	G	K	Y
Template Known Secondary structure			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	S																			T	T	T												S		S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1293	.	.																.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310											.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.
			1746	.	.	.	1750	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	R	N	L	S	F	I	L	G	G	N	Y	Y	F
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		N	T	D	D	A	I	N	A	N	I	R	Y	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1364	.	.	.	.	.	1370	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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