Job Description Q9JMS5 Confidence 15.58% Date Wed Jan 25 15:21:16 GMT 2012 Rank 43 Aligned Residues 177 % Identity 14% Template c2x4mD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla Resolution 2.55 Å

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		1479	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.																				.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	S	G	S	N	S	E	V	Y	D	N	L	K	T	S	Y	S	L	N	T	M	M	I	G	G	D	I	Y	N	W	T	D	G	Y	N	Y	S	H	I	G	I	M	G	G	M	G	S	A	A	N	K	T	T	S	T	N	N	K	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence		N	Q	S	E	W	T	D	H	S	S	H	P	A	T	N	V	N	.	H	A	N	E	Y	D	L	N	V	K	G	W	L	L	Q	D	E	N	Y	K	A	G	I	T	A	G	Y	Q	E	T	R	F	S	W	T	A	T	G	G	S	Y	S	Y	N	N	G	A	Y	T	G	N	F	P	K	G	V	R	V	I	G	Y	N
Template Known Secondary structure		S		S	S		S						T						.													S				S	S																				S						T	T	T	T							T	T
Template Predicted Secondary structure																			.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	D	G	Y	T	L	G	L	Y	H	V	F	Q	Q	N	I	S	D	G	L	N	E	S	E	R	Q	G	L	W	T	Y	S	S	I	Q	Y	M	D	Y	D	N	S	V	S	S	T	N	N	F	K	A	N	Y	G	V	N	G	F	R	L	T	G	E	V	G	Y	L	K	N	I	G	G	I	Q	P	S	D	F
Query Conservation
Alig confidence																				.																																		.	.	.																		.	.	.	.
Template Conservation																				.																																		.	.	.																		.	.	.	.
Template Sequence		Q	R	F	S	M	P	Y	I	G	L	A	G	Q	Y	R	I	N	D	.	F	E	L	N	A	L	F	K	F	S	D	W	V	R	A	H	D	N	D	E	H	Y	M	R	D	L	T	F	R	E	K	T	S	.	.	.	G	S	R	Y	Y	G	T	V	I	N	A	G	Y	Y	V	T	P	.	.	.	.	N	A	K	V
Template Known Secondary structure																		T	T	.																						G	G	G	T									.	.	.																	T	.	.	.	.	T
Template Predicted Secondary structure																				.																																		.	.	.																		.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.
		1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.							.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		Y	V	E	P	K	L	Y	L	S	H	T	E	L	S	G	G	V	V	E	D	L	Q	G	G	K	.	.	.	.	.	.	I	T	Y	P	N	S	L	T	I	I	E	P	G	V	F	F	S	Y	R	K	T
Query Conservation																											.	.	.	.	.	.
Alig confidence							.																				.	.	.	.	.	.
Template Conservation							.
Template Sequence		F	A	E	F	T	.	Y	S	K	Y	D	E	G	K	G	G	T	Q	T	I	D	K	N	S	G	D	S	V	S	I	G	G	D	A	A	G	I	S	N	K	N	Y	T	V	T	A	G	L	Q	Y	R	F
Template Known Secondary structure							.																T	T	T
Template Predicted Secondary structure							.
Template SS confidence
		242	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions