Job Description Q9JMS5 Confidence 5.71% Date Wed Jan 25 15:21:16 GMT 2012 Rank 81 Aligned Residues 109 % Identity 18% Template c1w0pA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:sialidase; PDBTitle: vibrio cholerae sialidase with alpha-2,6-sialyllactose Resolution 1.6 Å

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		1412	.	.	.	.	.	.	.	1420	.	.							.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.
Query Sequence		W	E	Y	A	L	N	K	K	R	K	N	.	.	.	.	.	.	W	Y	L	S	V	D	M	R	P	E	P	G	A	F	I	N	N	S	K	S	M	L	D	M	F	A	L	Q	R	Y	D	I	P	G	Q	H	R	Y	P	T	L	F	E	N	L	Y	N	N	G	M	W	I	Q	F	N	N	N	S	G	S	N	S	E
Query Conservation													.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																			.				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	T	Y	S	L	S	T	N	Q	H	A	Q	A	S	S	F	G	W	R	M	T	T	E	M	K	V	L	S	G	G	M	I	T	N	Y	.	Y	A	N	.	.	.	.	.	.	.	.	.	.	.	G	T	Q	R	V	L	P	I	I	S	L	D	S	S	G	N	L	V	V	E	F	E	G	Q	T	G	R	T	V	L
Template Known Secondary structure																															S		B				.				.	.	.	.	.	.	.	.	.	.	.	S	S											T	T	S							T	T			S
Template Predicted Secondary structure																																					.				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.												.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		1486	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500				.	.	.														.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Y	D	N	L	K	T	S	Y	S	L	N	T	M	M	.	.	.	I	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	Y	N	W	T	D	G	Y	N	Y	S	H	I	G	I	M	G	G	M	G	S	A	A	N	K	T	T	S	T	N	N	K	R
Query Conservation																	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																																		.	.	.	.	.
Template Sequence		A	T	G	T	A	A	T	E	Y	H	K	F	E	L	V	F	L	P	G	S	N	P	S	A	S	F	Y	F	D	G	K	L	I	R	D	N	I	Q	P	T	A	S	K	Q	N	M	I	V	.	.	.	.	.	W	G	N	G	S	S	N	T	D	G	V	A	A	Y	R
Template Known Secondary structure				G	G	G	G	G	S											S	S	S								T	T																			.	.	.	.	.						S	S	S
Template Predicted Secondary structure																																																		.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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