 |
Job Description | P27431 | Confidence | 98.13% | Date | Thu Jan 5 11:43:58 GMT 2012 |
Rank | 21 | Aligned Residues | 73 |
% Identity | 29% | Template | d1od5a2 |
SCOP info | Double-stranded beta-helix
| RmlC-like cupins
| Germin/Seed storage 7S protein
|
Resolution | 2.1 |
|
 |
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | |
130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
| . |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | G | G | V | G | P | H | L | D | Q | Y | . |
D | V | F | I | I | Q | G | T | G | R | R | R | W | R | V | G | E | K | L | Q | M | K | Q | H | C | P | H | P | D | L | L | Q | V | D | P | F | E | A | I | I | D | E | E | L | E | P | G | D | I | L | Y | I | P | P | G | F | P | H | E | G | Y | A | L | E | N | A | M |
Query Conservation |   |
  |
|   |
|   |   |   |
|   |
|   |   | . |
|   |
|   |   |
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |
|
|   |
|
|   |
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
Template Sequence |   |
R | N | G | I | Y | S | P | H | W | N | L | N | A | N | S | V | I | Y | V | T | R | G | K | G | R | V | R | V | V | N | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | G | N | A | V | F | D | G | E | L | R | R | G | Q | L | L | V | V | P | Q | N | F | V | V | A | E | Q | G | G | E | Q | G | L |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | S |
|  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
376 | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . |
  |
  |   |
197 | . | . | 200 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | Y | S | V | G | F | R | A | P | N |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
E | Y | V | V | F | K | T | H | H | N |
Template Known Secondary structure |   |
 |  |  |  |  |  | S | S | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
440 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|