Return to main results Retrieve Phyre Job Id

Job DescriptionP27431
Confidence98.13%DateThu Jan 5 11:43:58 GMT 2012
Rank21Aligned Residues73
% Identity29%Templated1od5a2
SCOP infoDouble-stranded beta-helix RmlC-like cupins Germin/Seed storage 7S protein
Resolution2.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120......... 130.........140.........150.........160.........170.........180.........190......
Predicted Secondary structure 









.
































Query SS confidence 











.


































































Query Sequence  PGGGVGPHLDQY. DVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAM
Query Conservation   
 
   
 
  .
 
  
  
 
 
 
                            
 


 



 
  
       
 
Alig confidence 











.

















................
































Template Conservation 



  

 

 
 

 

  
   
  
  ................         
  


 


 
      
  
  
Template Sequence  RNGIYSPHWNLNANSVIYVTRGKGRVRVVNC. . . . . . . . . . . . . . . . QGNAVFDGELRRGQLLVVPQNFVVAEQGGEQGL
Template Known Secondary structure  TT
SS


T................TS
TT

TT
Template Predicted Secondary structure 













................















Template SS confidence 















































































   376...380.........390.........400...... ...410.........420.........430.........
 
   197..200......
Predicted Secondary structure 



Query SS confidence 









Query Sequence  NYSVGFRAPN
Query Conservation    
      
Alig confidence 









Template Conservation    
       
Template Sequence  EYVVFKTHHN
Template Known Secondary structure  SSTT
Template Predicted Secondary structure 


Template SS confidence 









   440.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions