 |
Job Description | P27431 | Confidence | 97.19% | Date | Thu Jan 5 11:43:58 GMT 2012 |
Rank | 76 | Aligned Residues | 74 |
% Identity | 19% | Template | c3l2hD_ |
PDB info |
PDB header:isomerase | Chain: D: PDB Molecule:putative sugar phosphate isomerase; |
PDBTitle: crystal structure of putative sugar phosphate isomerase (afe_0303)2 from acidithiobacillus ferrooxidans atcc 23270 at 1.85 a resolution
|
Resolution | 1.85 Å |
|
 |
  |   |
110 | . | . | . | . | . | . | . | . | . | 120 | |
. | . | . | . | . | . | |
. | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
. |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|  |  | . |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Query Sequence |   |
D | L | M | I | S | F | S | V | P | G | G | . |
G | V | G | P | H | L | . |
D | Q | Y | D | V | F | I | I | Q | G | T | G | R | R | R | W | R | V | G | E | K | L | Q | M | K | Q | H | C | P | H | P | D | L | L | Q | V | D | P | F | E | A | I | I | D | E | E | L | E | P | G | D | I | L | Y | I | P | P | G | F | . |
P |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   | . |
|   |   |   |
|   | . |
|   |   |
|   |
|   |   |
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|
|   |
|   | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |
|   |
|
|   |
|   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |
|
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|   |
|   |   |
|   |   |   |   |   |
Template Sequence |   |
G | I | H | L | I | Q | I | E | P | G | K | E | S | T | E | Y | H | L | H | H | Y | E | E | E | A | V | Y | V | L | S | G | K | G | T | L | T | X | E | N | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | Y | P | I | A | P | G | D | F | V | G | F | P | C | H | A | A | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| T | T |
| B | S | S | S | S | B |  |  | S | S |
|
|  |  |  |  |  |  |  | S |
|  |  |  |  |  | T | T |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
| T | T |
|  |  |  |  |
| T | T | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
  |   |
187 | . | . | 190 | . | . | . | . | |
|
. | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
| . | . |
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | E | G | Y | A | L | E | N | . |
. |
A | M | N | Y | S | V | G | F | R | A | P |
Query Conservation |   |
|   |   |   |   |   |   |   | . | . |
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|   |
|
|
|   |   |
|
|
|
|   |   |   |   |
Template Sequence |   |
H | S | I | S | N | D | G | T | E | T | L | V | C | L | V | I | G | Q | R | L | D |
Template Known Secondary structure |   |
 |  |  |  |
|
| S | S | S |
|  |  |  |  |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|