Job Description P27431 Confidence 99.75% Date Thu Jan 5 11:43:58 GMT 2012 Rank 11 Aligned Residues 207 % Identity 12% Template c3kv5D_ PDB info PDB header:h3k4me3 binding protein, transferase Chain: D: PDB Molecule:jmjc domain-containing histone demethylation PDBTitle: structure of kiaa1718, human jumonji demethylase, in complex2 with n-oxalylglycine Resolution 2.39 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.				.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																						.						.	.	.
Query SS confidence																						.						.	.	.
Query Sequence		P	D	F	L	E	R	H	W	Q	K	R	P	V	V	L	K	R	G	F	N	.	N	F	I	D	P	.	.	.	I	S	P	D	E	L	A	G	L	A	M	E	S	E	V	D	S	R	L	V	S	H	Q	D	G	K	W	Q	V	S	H	G	P	F	E	S	Y	D	H	L	G	E	T	N	W	S	L	L	V	Q	A
Query Conservation																						.						.	.	.
Alig confidence																						.						.	.	.
Template Conservation
Template Sequence		Q	R	Y	L	E	K	H	G	F	D	V	P	I	M	V	P	K	L	D	D	L	G	L	R	L	P	S	P	T	F	S	V	M	D	V	E	R	Y	V	G	G	D	K	V	I	D	V	I	D	V	A	R	Q	A	D	S	K	M	T	L	H	N	Y	V	K	Y	F	M	N	P	N	R	P	K	V	L	N	V	I	S
Template Known Secondary structure										S		S						S		T	T	T			B				T	T												T	T								T	T	T	T																S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.							.	.	.	.	.	.	100										.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																														.	.
Query SS confidence										.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																														.	.
Query Sequence		V	N	H	W	H	E	P	T	.	.	.	.	.	.	A	A	L	M	R	P	F	.	.	.	.	.	.	.	.	.	R	E	L	P	D	W	R	I	D	D	L	M	I	S	F	S	V	P	G	G	G	V	G	P	H	L	D	Q	Y	.	.	D	V	F	I	I	Q	G	T	G	R	R	R	W	R	V	G	E	K	L
Query Conservation										.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																														.	.
Alig confidence										.	.	.	.	.	.								.	.	.	.	.	.	.	.	.																														.	.
Template Conservation
Template Sequence		L	E	F	S	D	T	K	M	S	E	L	V	E	V	P	D	I	A	K	K	L	S	W	V	E	N	Y	W	P	D	D	S	V	F	P	K	P	F	V	Q	K	Y	C	L	M	G	V	Q	D	S	Y	T	D	F	H	I	D	F	G	G	T	S	V	W	Y	H	V	L	W	G	E	K	I	F	Y	L	I	K	P	T
Template Known Secondary structure					T	T	S	G	G	G	G	G		B																	T	T		S	S						S								T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		149	150	.									.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.
Query Sequence		Q	M	K	.	.	.	.	.	.	.	.	Q	H	C	P	H	P	D	L	L	Q	V	D	P	F	E	A	I	I	D	E	E	L	E	P	G	D	I	L	Y	I	P	P	G	F	P	H	E	G	Y	A	L	E	N	A	M	N	Y	S	V	G	F	R	A	P	N	T	R	E	L	I	S	G	F	A	D
Query Conservation					.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	E	N	L	A	R	Y	E	S	W	S	S	S	V	T	Q	S	E	V	F	F	G	D	K	V	D	K	C	Y	K	C	V	V	K	Q	G	H	T	L	F	V	P	T	G	W	I	H	A	V	L	T	S	Q	D	C	M	A	F	G	G	N	F	L	H	N	L	N	I	G	M	Q	L	R	C	Y	E
Template Known Secondary structure													T		S	S	G	G	G	S		G	G	G	S	S	S									T	T							T	T																					S	T	T
Template Predicted Secondary structure
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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