Job Description P27431 Confidence 99.92% Date Thu Jan 5 11:43:58 GMT 2012 Rank 7 Aligned Residues 205 % Identity 15% Template c3k3nA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:phd finger protein 8; PDBTitle: crystal structure of the catalytic core domain of human phf8 Resolution 2.40 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.				30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.						.
Query SS confidence																					.	.	.						.
Query Sequence		D	F	L	E	R	H	W	Q	K	R	P	V	V	L	K	R	G	F	N	.	.	.	N	F	I	D	P	.	I	S	P	D	E	L	A	G	L	A	M	E	S	E	V	D	S	R	L	V	S	H	Q	D	G	K	W	Q	V	S	H	G	P	F	E	S	Y	D	H	L	G	E	T	N	W	S	L	L	V	Q	A	V
Query Conservation																					.	.	.						.
Alig confidence																					.	.	.						.																												.
Template Conservation																																																									.
Template Sequence		E	F	L	E	E	N	S	F	S	V	P	I	L	V	L	K	K	D	G	L	G	M	T	L	P	S	P	S	F	T	V	R	D	V	E	H	Y	V	G	S	K	E	I	D	V	I	D	V	T	R	Q	A	D	C	K	.	M	K	L	G	D	F	V	K	Y	Y	Y	S	G	K	R	E	K	V	L	N	V	I	S	L
Template Known Secondary structure								T	T		S					S	S		T	T	S			B				T	T																				T	T	T	T					.											T		S	S			S
Template Predicted Secondary structure																																																									.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Query Sequence		N	H	W	H	E	P	T	A	A	L	M	R	P	F	R	E	L	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	R	I	D	D	L	M	I	S	F	S	V	P	G	G	G	V	G	P	H	L	D	Q	Y	D	V	.	.	F	I	I	Q	G	T	G	R	R	R	W	R	V	G	E	K	L	Q
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.
Template Conservation
Template Sequence		E	F	S	D	T	R	L	S	N	L	V	E	T	P	K	I	V	R	K	L	S	W	V	E	N	L	W	P	E	E	C	V	F	E	R	P	N	V	Q	K	Y	C	L	M	S	V	R	D	S	Y	T	D	F	H	I	D	F	G	G	T	S	V	W	Y	H	V	L	K	G	E	K	I	F	Y	L	I	R	P	T	N
Template Known Secondary structure				T	T	S	S	G	G	G	T		B															S		S	S		S	S						S								T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
										150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	M	K	Q	H	C	P	H	P	D	L	L	Q	V	D	P	F	E	A	I	I	D	E	E	L	E	P	G	D	I	L	Y	I	P	P	G	F	P	H	E	G	Y	A	L	E	N	A	M	N	Y	S	V	G	F	R	A	P	N	T	R	E	L	I	S	G	F	A	D
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	L	T	L	F	E	C	W	S	S	S	S	N	Q	N	E	M	F	F	G	D	Q	V	D	K	C	Y	K	C	S	V	K	Q	G	Q	T	L	F	I	P	T	G	W	I	H	A	V	L	T	P	V	D	C	L	A	F	G	G	N	F	L	H	S	L	N	I	E	M	Q	L	K	A	Y	E
Template Known Secondary structure												S	S	T	T	G	G	G	S		G	G	G	S	S	S									T	T							T	T																					S	S	S
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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