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Job DescriptionP27431
Confidence100.00%DateThu Jan 5 11:43:58 GMT 2012
Rank6Aligned Residues212
% Identity15%Templatec3k2oB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:bifunctional arginine demethylase and lysyl-hydroxylase PDBTitle: structure of an oxygenase
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10......... 20.........30.... .....40.........50.........60.........70.........80..
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Query Sequence  TLNWPDFLERHWQK. RPVVLKRGFNNFIDP. . ISPDELAGLAMESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLL
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Template Sequence  QLSVEEFVERYERPYKPVVLLNAQEGWSAQEKWTLERLKRKYRNQKFKCGEDNDGYSVKXKXKYYIEYXESTRDDSPLYI
Template Known Secondary structure  G

TTTTT

S

TT
T
STTT

TTS
TT


SS


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   53......60.........70.........80.........90.........100.........110.........120.........130..
 
   83......90.........100.. .......110.........120.........130 .........140........
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Query Sequence  VQAVNHWHEPTAALMRPFRE. . . . . . . . . . . . LPDWRIDDLMISFSVPGGGVGPHLDQYD. . VFIIQGTGRRRWRVGEKL
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Template Sequence  FDSSYGEHPKRRKLLEDYKVPKFFTDDLFQYAGEKRRPPYRWFVXGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTS
Template Known Secondary structure 

GGGSTTGGGGGGG



GGG


GGGGG
TTTS



TT


GGG
S

TT
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   133......140.........150.........160.........170.........180.........190.........200.........210..
 
   149150.... .....160.........170.........180.........190.........200......
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Query Sequence  QMKQHC. . . . . . . . . . . . . . . . . . . . . . PHPDLLQVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPN
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Template Sequence  TPRELIKVTRDEGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASST
Template Known Secondary structure  S



GGGTT
TTSTTS
GGG


TT

TT
SS


TT
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   213......220.........230.........240.........250.........260.........270.........280.........290..
 
   207..210.......
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Query Sequence  TRELISGFADY
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Template Conservation 
          
Template Sequence  NFPVVWHKTVR
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   293......300...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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