Return to main results Retrieve Phyre Job Id

Job DescriptionP27431
Confidence26.22%DateThu Jan 5 11:43:58 GMT 2012
Rank174Aligned Residues73
% Identity19%Templatec3es4B_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein duf861 with a rmlc-like cupin fold; PDBTitle: crystal structure of protein of unknown function (duf861) with a rmlc-2 like cupin fold (17741406) from agrobacterium tumefaciens str. c583 (dupont) at 1.64 a resolution
Resolution1.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150.........160.........170.........180.........190
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  LMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILYIPPGFPHEGY
Query Conservation          
 
   
 
  
 
  
  
 
 
 
                            
 


 



 
  
   
Alig confidence 
















.



















.....................




















Template Conservation   



 


        . 

   



   

  

 .....................     


    
 
  
 

Template Sequence  VAVWXAEPGIYNYAGRD. LEETFVVVEGEALYSQADAD. . . . . . . . . . . . . . . . . . . . . PVKIGPGSIVSIAKGVPSRLE
Template Known Secondary structure 
S


S.

TT

.....................

TT

TT

Template Predicted Secondary structure 





.







.....................







Template SS confidence 















































































   43......50......... 60.........70......... 80.........90.........100
 
   191........200.....
Predicted Secondary structure 






Query SS confidence 














Query Sequence  ALENAMNYSVGFRAP
Query Conservation      
   
      
Alig confidence 














Template Conservation 
 
  

  

   
Template Sequence  ILSSFRKLATVIPKP
Template Known Secondary structure 
S


Template Predicted Secondary structure 




Template SS confidence 














   101........110.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions