Job Description P27431 Confidence 97.04% Date Thu Jan 5 11:43:58 GMT 2012 Rank 86 Aligned Residues 73 % Identity 23% Template c3d82A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a cupin-2 domain containing protein (sfri_3543)2 from shewanella frigidimarina ncimb 400 at 2.05 a resolution Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		W	R	I	D	D	L	M	I	S	F	S	V	P	G	G	G	V	G	P	H	L	D	.	Q	Y	D	V	F	I	I	Q	G	T	G	R	R	R	W	R	V	G	E	K	L	Q	M	K	Q	H	C	P	H	P	D	L	L	Q	V	D	P	F	E	A	I	I	D	E	E	L	E	P	G	D	I	L	Y	I	P	P	G
Query Conservation																								.
Alig confidence																								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	X	N	D	Y	Q	F	K	L	V	K	V	E	G	E	F	V	W	H	E	H	A	D	T	D	E	V	F	I	V	X	E	G	T	L	Q	I	A	F	R	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	T	L	Q	A	G	E	X	Y	V	I	P	K	G
Template Known Secondary structure					T	T															B			T	T										S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T							T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	H	E	G	Y	A	L	E	N	A	M	N	Y	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	H	K	P	X	A	K	E	E	C	K	I	X	I	I
Template Known Secondary structure				B
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions