Job Description P27431 Confidence 100.00% Date Thu Jan 5 11:43:58 GMT 2012 Rank 3 Aligned Residues 248 % Identity 16% Template c3al6A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:jmjc domain-containing protein c2orf60; PDBTitle: crystal structure of human tyw5 Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																.															.																																										.	.	.	.	.	.	.	.	.
Query SS confidence																.															.																																										.	.	.	.	.	.	.	.	.
Query Sequence		T	L	N	W	P	D	F	L	E	R	H	W	Q	K	.	R	P	V	V	L	K	R	G	F	N	N	F	I	D	.	P	I	S	P	D	E	L	A	G	L	A	M	E	S	E	V	D	S	R	L	V	S	H	Q	D	G	K	W	Q	V	S	H	G	P	F	E	S	Y	D	H	L	.	.	.	.	.	.	.	.	.
Query Conservation																.															.																																										.	.	.	.	.	.	.	.	.
Alig confidence																.															.													.	.																												.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.
Template Sequence		G	V	S	R	E	Q	F	M	Q	H	L	Y	P	Q	R	K	P	L	V	L	E	G	I	D	L	G	P	C	T	S	K	W	T	V	D	Y	L	S	Q	V	G	G	.	.	K	K	E	V	K	I	H	V	Q	M	D	K	N	F	V	Y	R	T	L	P	F	D	Q	L	V	Q	R	A	A	E	K	H	K	E	F	F
Template Known Secondary structure		S										T	G	G	G								T					T																.	.	S																																S	S		S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
				75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90										.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure		.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	G	E	T	N	W	S	L	L	V	Q	A	V	N	H	W	H	.	.	.	.	.	.	.	.	.	E	P	T	A	A	L	M	R	P	F	R	E	L	P	D	W	R	I	D	D	L	M	I	S	F	S	V	P	G	G	G	V	G	P	H	L	D	Q	Y	D	V	F	I	I	Q	G	T	G	R	R	R	W	R
Query Conservation		.	.																	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	S	E	D	E	K	Y	Y	L	R	S	L	G	E	D	P	R	K	D	V	A	D	I	R	K	Q	F	P	L	L	K	G	D	I	K	F	P	E	F	F	K	E	E	Q	F	F	S	S	V	F	R	I	S	S	P	G	L	Q	L	W	T	H	Y	D	V	M	D	N	L	L	I	Q	V	T	G	K	K	R	V	V
Template Known Secondary structure		S		T	T										S	S	T	T	T														T	T							S		T	T	T											T	T									S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.												.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		V	G	E	K	L	Q	M	K	Q	H	C	.	.	.	.	.	.	.	.	.	.	.	P	H	P	D	L	L	Q	V	D	P	F	E	.	.	A	I	I	D	E	E	L	E	P	G	D	I	L	Y	I	P	P	G	F	P	H	E	G	Y	A	L	E	N	A	M	N	Y	S	V	G	F	R	A	P	N	T	R	E	L
Query Conservation													.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.													.	.																																						.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		L	F	S	P	R	D	A	Q	Y	L	Y	L	K	G	T	K	S	E	V	L	N	I	D	N	P	D	L	A	K	Y	P	L	F	S	K	A	R	R	Y	E	C	S	L	E	A	G	D	V	L	F	I	P	A	L	W	F	H	N	V	I	S	E	E	F	G	V	G	V	N	I	F	W	K	.	.	.	.	.	.	.
Template Known Secondary structure					G	G	G		G	G	G				T	T			S				S	S	S			T	T	T		G	G	G	G	G										T	T							T	T								S	S											.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	G	F	A	D	Y	V	L	Q	R	E	L	G	G	N	Y	Y	S	D	P	D	V	P	P	R	A	H	P	A	D	V	L	P	Q	E	M	D	K	L	R	E	M	M	L	E	L	I	N	Q	P	E	H	F	K	Q	W	F	G	E	F	I	S	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	H	L	P	S	E	C	Y	D	K	T	D	T	Y	G	N	K	D	P	T	A	A	S	R	A	A	Q	I	L	D	R	A	L	K	T	L	A	E	L	P	E	E	Y	R	D	F	Y	A	R	R	M	V	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.		S		G	G	G	S		S	S		S	S	S		S																				T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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