Job Description P27431 Confidence 98.46% Date Thu Jan 5 11:43:58 GMT 2012 Rank 15 Aligned Residues 164 % Identity 14% Template c2xueB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:lysine-specific demethylase 6b; PDBTitle: crystal structure of jmjd3 Resolution 2.00 Å

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		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.																.	.	.
Predicted Secondary structure																								.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	D	L	M	I	S	F	S	V	P	G	G	G	V	G	P	H	L	D	Q	Y	.	.	.	D	V	F	I	I	Q	G	T	G	R	R	R	W	R	V	G	E	K	L	Q	M	K	Q	H	C	P	H	P	D	L	L	Q	V	D	P	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	I
Query Conservation																								.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	N	T	V	Q	L	Y	M	K	V	P	G	S	R	T	P	G	H	Q	E	N	N	N	F	C	S	V	N	I	N	I	G	P	G	D	C	E	W	F	A	V	H	E	H	Y	W	E	T	I	S	A	F	C	D	R	H	G	V	D	Y	L	T	G	S	W	W	P	I	L	D	D	L	Y	A	S	N	I	P	V	Y
Template Known Secondary structure		T	T	S								T	T									G	G	G											S									G	G	G											T	T			T	T	T	S		B										T	T
Template Predicted Secondary structure
Template SS confidence
		1373	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.
Query SS confidence																																											.	.	.
Query Sequence		D	E	E	L	E	P	G	D	I	L	Y	I	P	P	G	F	P	H	E	G	Y	A	L	E	N	A	M	N	Y	S	V	G	F	R	A	P	N	T	R	E	L	.	.	.	I	S	G	F	A	D	Y	V	L	Q	R	E	L	G	G	N	Y	Y	S	D	P	D	V	P	P	R	A	H	P	A	D	V	L	P	Q	E
Query Conservation																																											.	.	.
Alig confidence																																											.	.	.
Template Conservation
Template Sequence		R	F	V	Q	R	P	G	D	L	V	W	I	N	A	G	T	V	H	W	V	Q	A	T	G	W	C	N	N	I	A	W	N	V	G	P	L	T	A	Y	Q	Y	Q	L	A	L	E	R	Y	E	W	N	E	V	K	N	V	K	S	I	V	P	M	I	H	V	S	W	N	V	A	R	T	V	K	I	S	D	P	D	L
Template Known Secondary structure							T	T							T	T								S	S	S										B	S	S																	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		1453	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	K	L	R	E	M	M	L	E	L	I	N	Q	P	E	H	F	K	Q	W	F	G	E	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	M	I	K	F	C	L	L	Q	S	M	K	H	C	Q	V	Q	R	E	S	L	V	R	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1533	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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