Job Description P27431 Confidence 100.00% Date Thu Jan 5 11:43:58 GMT 2012 Rank 1 Aligned Residues 336 % Identity 14% Template c2xdvA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:myc-induced nuclear antigen; PDBTitle: crystal structure of the catalytic domain of flj14393 Resolution 2.57 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		T	L	N	W	P	D	F	L	E	R	H	W	Q	K	R	P	V	V	L	K	R	G	F	N	N	.	.	.	.	F	I	D	P	I	S	P	D	E	L	A	G	L	A	M	E	S	E	V	D	S	R	L	V	S	H	Q	D	G	K	W	Q	V	S	H	G	P	F	E	S	Y	D	H	L	G	E	T	N	W	S	L
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	I	K	T	E	T	F	F	K	E	F	W	E	Q	K	P	L	L	I	Q	R	D	D	P	A	L	A	T	Y	Y	G	S	L	F	K	L	T	D	L	K	S	L	C	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	F	D	Q	K	R	A	T	I
Template Known Secondary structure		T	S									T	T	T	T	S																									S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																												.	.	.	.	.	.	.	.	100
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		L	V	Q	A	V	N	H	W	H	E	P	T	A	A	L	M	R	P	F	R	E	L	P	D	W	R	I	D	D	L	M	I	S	F	S	V	P	G	G	.	G	V	G	P	H	L	D	Q	Y	D	V	F	I	I	Q	G	T	G	R	R	R	W	R	V	G	E	K	L	Q	M	K	Q	H	C	P	H	P	D	L	L
Query Conservation																																									.
Alig confidence																														.											.																																							.
Template Conservation																														.																																																		.
Template Sequence		Q	F	H	Q	P	Q	R	F	K	D	E	L	W	R	I	Q	E	K	L	E	C	Y	F	G	S	L	V	G	.	S	N	V	Y	I	T	P	A	G	S	Q	G	L	P	P	H	Y	D	D	V	E	V	F	I	L	Q	L	E	G	E	K	H	W	R	L	Y	H	P	T	V	P	L	A	R	E	Y	S	V	E	.	A
Template Known Secondary structure						G	G	G	T																T	S				.								T	T		B		S		S				S	S									S										S	S	T	T		S	S					.
Template Predicted Secondary structure																														.																																																		.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.								.
Query SS confidence																																				.	.	.								.
Query Sequence		Q	V	D	P	F	E	A	I	I	D	E	E	L	E	P	G	D	I	L	Y	I	P	P	G	F	P	H	E	G	Y	A	L	E	N	.	.	.	A	M	N	Y	S	V	G	.	F	R	A	P	N	T	R	E	L	I	S	G	F	A	D	Y	V	L	Q	R	E	L	G	G	N	Y	Y	S	D	P	D	V	P	P	R
Query Conservation																																				.	.	.								.
Alig confidence																																				.	.	.								.
Template Conservation
Template Sequence		E	E	R	I	G	R	P	V	H	E	F	M	L	K	P	G	D	L	L	Y	F	P	R	G	T	I	H	Q	A	D	T	P	A	G	L	A	H	S	T	H	V	T	I	S	T	Y	Q	N	N	S	W	G	D	F	L	L	D	T	I	S	G	L	V	F	D	T	A	K	E	D	V	E	L	R	T	G	I	P	R	Q
Template Known Secondary structure		T	T	T	S		S		S							T	T							T	T									S	S	S												T	T		S																									S				T	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		A	H	P	A	D	V	L	P	Q	E	M	D	K	L	R	E	M	M	L	E	L	I	N	Q	P	E	H	F	K	Q	W	F	G	E	F	I	S	Q	S	R	H	E	L	D	I	A	P	P	E	P	P	Y	Q	P	D	E	I	Y	D	A	L	.	.	K	Q	G	E	V	L	V	R	L	G	G	L	R	V	L	R	I
Query Conservation																																																															.	.
Alig confidence																																																															.	.
Template Conservation
Template Sequence		L	L	L	Q	E	S	T	T	V	A	T	R	R	L	S	G	F	L	R	T	L	A	D	R	L	E	G	T	K	E	L	L	S	S	D	M	K	K	D	F	I	M	H	R	L	P	P	Y	S	A	K	L	P	R	L	D	S	V	V	R	L	Q	F	K	D	H	I	V	L	T	V	L	P	E	K	M	V	Y	I	Y
Template Known Secondary structure		T	T	T																								T							S	S									S											T	T	S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		315	.	.							.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure					.	.	.	.	.	.							.	.
Query SS confidence					.	.	.	.	.	.							.	.
Query Sequence		G	D	D	.	.	.	.	.	.	V	Y	A	N	G	E	.	.	K	I	D	S	P	H	R	P	A	L	D	A	L	A	S	N	I	A	L	T	A	E	N	F	G	D	A	L	E	D	P	S	F	L	A	M	L	A	A	L	V	N	S	G	Y	W	F	F
Query Conservation					.	.	.	.	.	.							.	.
Alig confidence					.	.	.	.	.	.							.	.																									.
Template Conservation																																											.
Template Sequence		H	S	L	K	N	S	R	E	T	H	M	M	G	N	H	G	L	R	F	P	L	S	H	L	D	A	L	K	Q	I	W	N	S	P	A	I	S	V	K	D	L	.	K	L	T	T	D	E	E	K	E	S	L	V	L	S	L	W	T	E	C	L	I	Q	V
Template Known Secondary structure			S	T	T			S	T	T	T	T	T									G	G	G									T		S	S			G	G	G	S	.	S		S	S														T	T
Template Predicted Secondary structure																																											.
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.		.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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