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Job DescriptionP27431
Confidence98.18%DateThu Jan 5 11:43:58 GMT 2012
Rank18Aligned Residues73
% Identity16%Templatec2pfwB_
PDB info PDB header:unknown functionChain: B: PDB Molecule:cupin 2, conserved barrel domain protein; PDBTitle: crystal structure of a rmlc-like cupin (sfri_3105) from shewanella2 frigidimarina ncimb 400 at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   111........120.........130.........140.........150.........160.........170.........180.........190
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Query Sequence  LMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILYIPPGFPHEGY
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Template Sequence  AVKIWFDKGAEGYVHAHRHSQVSYVVEGEFHVNVDGV. . . . . . . . . . . . . . . . . . . . . . IKVLTAGDSFFVPPHVDHGAV
Template Known Secondary structure 
TT

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TT......................
TT

TT

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   35....40.........50.........60.........70. ........80.........90..
 
   191........200.....
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Query Sequence  ALENAMNYSVGFRAP
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Template Sequence  CPTGGILIDTFSPAR
Template Known Secondary structure  TT
S

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   93......100.......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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