Job Description P28304 Confidence 100.00% Date Thu Jan 5 11:44:39 GMT 2012 Rank 18 Aligned Residues 323 % Identity 19% Template c3fbgA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative arginate lyase; PDBTitle: crystal structure of a putative arginate lyase from staphylococcus2 haemolyticus Resolution 1.60 Å

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		2	.	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		A	T	R	I	E	F	H	K	H	.	.	.	G	G	P	E	V	L	Q	A	V	E	F	T	P	A	D	P	A	E	N	E	I	Q	V	E	N	K	A	I	G	I	N	F	I	D	T	Y	I	R	S	G	L	Y	P	P	P	S	L	P	S	G	L	G	T	E	A	A	G	I	V	S	K	V	G	S	G	V	K	H
Query Conservation											.	.	.
Alig confidence											.	.	.																																												.	.
Template Conservation																																																									.	.
Template Sequence		L	K	A	I	G	F	E	Q	P	F	K	L	S	D	G	N	L	F	K	T	F	N	L	D	I	P	E	P	K	V	H	E	I	L	V	K	I	Q	S	I	S	V	N	P	V	D	T	K	Q	R	L	M	D	V	S	.	.	K	A	P	R	V	L	G	F	D	A	I	G	V	V	E	S	V	G	N	E	V	T	M
Template Known Secondary structure							B	S	S				G	G	G																T	T																			T	T	S			S	.	.	S	S		B															T	T			S
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.
Predicted Secondary structure																.	.																																																					.	.	.	.	.
Query SS confidence																.	.																																																					.	.	.	.	.
Query Sequence		I	K	A	G	D	R	V	V	Y	A	Q	S	A	L	.	.	G	A	Y	S	S	V	H	N	I	I	A	D	K	A	A	I	L	P	A	A	I	S	F	E	Q	A	A	A	S	F	L	K	G	L	T	V	Y	Y	L	L	R	K	T	Y	E	I	K	P	D	E	Q	F	.	.	.	.	.	L	F	H	A	A	A	G
Query Conservation																.	.																																																					.	.	.	.	.
Alig confidence																.	.																																																					.	.	.	.	.
Template Conservation
Template Sequence		F	N	Q	G	D	I	V	Y	Y	S	G	S	P	D	Q	N	G	S	N	A	E	Y	Q	L	I	N	E	R	L	V	A	K	A	P	K	N	I	S	A	E	Q	A	V	S	L	P	L	T	G	I	T	A	Y	E	T	L	F	D	V	F	G	I	S	R	N	R	N	E	N	E	G	K	T	L	L	I	I	N	G	A
Template Known Secondary structure				T	T									T	T	S			S	S	B	S						G	G	G						S	S	S						T	T	S													T	T	S				S	S					T	T							S	T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	L	I	A	C	Q	W	A	K	A	L	G	A	K	L	I	G	T	V	G	T	A	Q	K	A	Q	S	A	L	K	A	G	A	W	Q	V	I	N	Y	R	E	E	D	L	V	E	R	L	K	E	I	T	G	G	K	K	V	R	V	V	Y	D	S	V	G	R	D	T	W	E	R	S	L	D	C	L	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	V	G	S	I	A	T	Q	I	A	K	A	Y	G	L	R	V	I	T	T	A	S	R	N	E	T	I	E	W	T	K	K	M	G	A	D	I	V	L	N	H	K	E	S	L	L	N	Q	F	K	T	Q	G	I	E	L	V	D	Y	V	F	C	T	F	N	T	D	M	Y	Y	D	D	M	I	Q	L	V	K	P
Template Known Secondary structure		S													T	T									S											T		S					T	T	S										T										S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.		.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		R	G	L	M	V	S	F	G	N	S	S	G	A	V	T	G	V	N	L	G	I	L	N	Q	K	G	S	L	Y	V	T	R	P	S	L	Q	G	Y	I	T	T	R	E	E	L	T	E	A	S	N	E	L	F	S	L	I	A	S	G	V	I	K	V	D	V	.	A	E	Q	Q	K	Y	P	L	K	D	A	Q	R	A
Query Conservation																																																																			.
Alig confidence																																																																			.
Template Conservation
Template Sequence		R	G	H	I	A	T	I	V	A	F	E	N	D	Q	D	L	N	A	L	K	P	K	S	L	S	F	S	H	E	F	M	F	A	R	P	L	N	Q	T	D	D	M	I	K	H	H	E	Y	L	E	D	I	T	N	K	V	E	Q	N	I	Y	Q	P	T	T	T	K	V	I	E	G	L	T	T	E	N	I	Y	Q	A
Template Known Secondary structure								S	S			S	S				G	G	G	G	T	T	T	T								T	T					T	T		T	T	T																T	T	S	S										S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	I	L	E	S	R	A	T	Q	G	S	S	L	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	Q	I	L	E	S	N	T	M	I	G	K	L	V	I	N
Template Known Secondary structure							T	T				S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions